Genomic Feature

ihb588

ID
ZDB-ALT-220315-3
Name
ihb588
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 52208815 - 52208879 (GRCz11) (1) Details
Nucleotide change
CGCGTCAGCCAGTTTAACCACTCCACACCCAGAACAAACGCAACAGTTCCCAGGCCCAACACTTT/-
Variant Notes
65bp deletion between 40bp to 104bp of the wild-type pld6 coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
65 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACATGCATTATGAATGTGACCAACAGTCTACATCATACTAGAAATACGGTGAATTAAACTGCACAACCCAAAAGAAACAATGCTAATCAAAAGGATACGAGTTGTCTCTCTATGAAACTAAAATTATTATCTTACTTTTTTGCATTTATGAGGGAAAAGCTCAGTTATGGACGTGACAGATGGGAAATTGGCGCTTGTGTGACTTTGGTAATTCAAACATAATTGTTTGAAATCATTGTCAGAGACATTTTAGAGTATTTTTGCAGTACTATAAAATACAAGCCCAGGCAAACAACGTAGAAAGGGCTCCACTATTTTGGCAAAACCTTTTTTTTCCATGGAGAGGTTGACATTTGGTCAAATGCATTAGTTTGATTCGAAAAGGTTGACTGAAGTACCAGGGAAAGCTTCGGTGAGATGTGAACAGGTGCTCAACGCAGACTTGAGGTGAAGGAAAGAAAAGCACTTCTTTTAAGGGCCCTCGAGAGTCTCTCAGCCGG
CGCGTCAGCCAGTTTAACCACTCCACACCCAGAACAAACGCAACAGTTCCCAGGCCCAACACTTT/- CATCAGCTCCTTAAATGACATCTGAGAACAAAGAGAGAAAAACAAAACATTAGAACAATAATTTCTGTGTTAAATTACACTTTAGGAACAAACACATGTACATTTTTATCTAAAACTTGTTTGAGTACCGCATATACTTTATACAGCAGTCAGGATAAAAATGTTTTTCTTAAATTTCCTAAGACAAGAATAGATGTTGTTCAAAGGTTTGTGGGAAAATTTGATCAAAGATTTTGATCCACTTTAAATGTTGTAATCTGTAGTTCATGTAAACAGTCAGTCACAAATCATGAACACTCATTTCTGATTCTGGTCAGTGACAAAAATTTAACATTATTAATGCATAATGACCTGTGTCCATTGCTTCAGACCATCCATTTACATTCTTTCACTTTCATATTTTCATACTCATACTTATTTATAAGGACCAAAATAAATCAGTCATGAAGGACATTTATATTGAACTGCACAATAATGTTATGATCAGTGCACAAGAGTAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations