Genomic Feature
ot206
- ID
- ZDB-ALT-220209-7
- Name
- ot206
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Steve F. Perry Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 24: 32664591 - 32664599 (GRCz11) (1) Details
- Nucleotide change
- TATCCCCAG/AA
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp inserted / 9 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ATTAACTAACATGAACAAACACTGTGTGCATTGTTCATTGTTTGTATATGTTAGTAAAATGCATTAACTAATACAATCTTATTGTAAAATGTTACCAATAAATAAATACAACTTTTAATGTGCAAATAATTTCGCAGTAAATTTCAGACAAAATATAAGAACAATGATCGGCAGCCTATAGCCAAATGTATGCATTTGAATTGCGCAGTATACTGCACTATAAACTCCGCATTTAGGGGAATAAGAGGAGAAAATACAGCTCTACTTTCAACGCATTTACGTTTTACGCATCAACATATTTAATTTCCCACACATTACATGTACATTATGTACTTGTCACACTATTGCTGACTGTGCAGAAGACAAGGTGAACATGTCTTAGTTGCTTAAAAGGACAAATGCAGTCACTGAGGAAAGCAGAGAATATGTCATTACATAAACACACCACAGAATCACCTATATGGATAATAAATAAGAAAGTCGTACCGTTATGCTTATCG
TATCCCCAG/AA TGGTCAGCCATTCCGCCAGCTGTGCTGCAGTCCTCAAGTGTCCTGAAACACTGTCAGTGTCCTCACACAGATGAGCTGTGGTTTATATAGCCGCTGTTTGCCCACATGACCGTACATTAAGTGTGATCAGCAGGAGGAGCCGCGCGTGCGATCAATAATGCGCGCTCTCTGTCCCTCACGCGCGCGCTCGATCCATCTCATGGAATGCGCGGTTCCATCATTATGAATCTGCGCGCTGCTGCTTTGATCTACAGATACGCCGACATTCGAAACACGTTCTGAACATTCTGCGATTGCGCAATCGGAGACTTGTGGCGCGCCTGGTCCTGGTGACGTCGATGACGGTGTGACATAGTAATGACAATGAGTGCGGTAATGATTCATCATCACTGTGAACGAGCCGCGCGCGGACTCAGTGGCAGTTTACGCAACACTGCGCTGCTTTGGCTAATATTTGACGATTTACAGCGAAACACGTTGTGGTTGGAGACAGGGGTAGC - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
ca2ot206/ot206 | Homozygous | ♀+/- ♂+/- | 6 figures ![]() | Fig. 1 ![]() | |
ca2ot206/+ | Heterozygous | ♀+/- ♂+/- | 3 figures ![]() | Fig. 1 ![]() |
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Supplemental Information
- Genotyping protocol
- None
- Kunert, E., Joyce, W., Pan, Y.K., Chen, A., Perry, S.F., Gilmour, K.M. (2022) The role of cytosolic carbonic anhydrase Ca17a in cardiorespiratory responses to CO2 in developing zebrafish (Danio rerio). American journal of physiology. Regulatory, integrative and comparative physiology. 323(4):R532-R546
- Zimmer, A.M., Mandic, M., Yew, H.M., Kunert, E., Pan, Y.K., Ha, J., Kwong, R.W.M., Gilmour, K.M., Perry, S.F. (2020) Use of a carbonic anhydrase ca17a knockout to investigate mechanisms of ion uptake in zebrafish (Danio rerio). American journal of physiology. Regulatory, integrative and comparative physiology. 320(1):R55-R68
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