Genomic Feature

zf3363

ID
ZDB-ALT-220124-11
Name
zf3363
Synonyms
  • No. 24 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 9
Variants
Variant Type
Delins
Variant Location
Chr 9: 1950495 - 1950500 (GRCz11) (1) Details
Nucleotide change
CCGCGG/TGACACATGACACATGACCTGACACATGACACATGAC
Variant Notes
Line contains a 6 bp deletion and a 32 bp insertion.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
32 bp inserted / 6 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTTTTACCAAAAGTAACAAGCACTTCTTTAAAGTGAAATAGCAGATTTTAAGTGTCTGTGATTTAAAAATAAAAAAGTTTATCATGGCTAAATTGTTTAAATCAAAGCTTCGGGCCAAGTGGACTCTCAATACTGCAAGAGTGGCCAACACAGCTAGCGGCCTATTTCCTAAGCAATAAAAATTTATGGCTGGTGTAATTGGCGGCCCCTTCAGAGGAACCCATAAATATTTCACTCAATGATTTTAACTGTGGCTAAAACAGCAGAATAGGGATGGCCTATGCGAGCAGACAGCAAAGAGAGTGGATCTTACCCGTAGTAACGTGCACTTTCTTCATCCACGGGTAAACTACAGCAGGCTGCTTCGTTGGTATCCCGTTCTGGGTCTTTGTGTTTTGTTGTTGTCCACCAGTCCTCGATCCGGAAATCTGGACCGCGGGACACTGCTCTGTCTGTGCAGGGAAAGGGCTAGGGGTGCTGGCTTGATCCTGCACATGACC
CCGCGG/TGACACATGACACATGACCTGACACATGACACATGAC CTGCACCGACGAGCCCTGGACAGTGCTACAACTGTAAGGCTGTTCAGAGTAGTTTGACCGTGAATAGATTCCGGGATGCTGGAAATCAGTGTCCTGCGACGGACTGTAGTAGCCTGGGCTCTGTTCAGGTATATAGCTGTTCTGAGAATATTCCTCGCAAGGAGGAAATTTGGGATCCACATACTTGGAGTTCACCATGTACGAACTCATGGCCATTAATTTCTGAAGGTAGGAAATACTAATTTTTCTCGAGTTGTCTTTTTTTCCTCCCTCCATAAAGCCCTCCTACTTGCTGTCAACTGAATAAAGTTAGCCTACCATGTGACCAGCTTGGCCAATCGAGGTGGAGGGACTTCATCAACCGAGAAGAAGCTGTGCACACCTAGTAGTGATTTTTACAAACTTCACATTATCTCTCAATTAGGATGGAAATAACACAATATAAAATTTTATTGATTAAATACCCATATAAAAGAAAGAGACAAGGAGGAAAGCAGTGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hoxd4azf3363/zf3363Homozygous♀+/- ♂+/-2 figures from Zhang et al., 2020Fig. 4 from Zhang et al., 2020
hoxd4azf3363/zf3363 + MO1-hoxd4aComplexFig. 6 from Zhang et al., 2020
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations