Genomic Feature

zc102

ID
ZDB-ALT-210816-2
Name
zc102
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Bonkowsky Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 2904158 - 2904167 (GRCz11) (1) Details
Nucleotide change
AGCCGCTGCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATGCTTGAATTCACTTTTTAAAGCCAACATTGTTGATTAAAGATATTACATTTGTGTGTTTTCAATAATATTACCTTATTTTGTGCTGCACACTCTTCACAGTATGTAACGGAAATGTTTGTTCGCTGAGAAGCTACCTCAACAGGGCGTAAGCGTTAAAAAGATACACGGCCGCTGATTGGTCCATTCTATTAAGCGCTGAGAAAAGTAACAGTGGTCATCTGATGTCTTCAAAATTAAAAACCTGAACAAAATTCTGACCTAAATAATGGTAGTGACAAACTGTATGTACATATTTAGTCTTAGTTATGCAGGTAAGAGGTAAAGTTGCATAATTAACAGTAGATGCGTTATACTGACTAACTAGAGAACTTCCGGGTCACTATCTCACGCCTGTTGCCGTTGTGTTGCGTTTGACACACCGCGGACAAACATGGCAGGAAAAGCAGGCAAACAAAATCGTCCCAGAAAGCCGGTGTCGGATAAAGATGAAGAGGAGC
AGCCGCTGCA/- GGCCGTTCTGGTGGCCGACAGTTTCAACCGCAGGTTTTTCCCCATCACTAAAGACCAGCCGAGGGTGAGTGAAATAAATGAAGACAGCGTTACCGGGAGCACATGCTGCAGCTCTTCTGTACAATAACATGTTAATCAAACACTGTAACGTTAATGTAGCACAAGGTAGAGCTGCTGTTTTGTTTTTGGACGGGGGCGTCGTTTAAATATGTCAGTGTTTGAGGTACAATTGTAGTAACAGTGTTTGTTTACATCGTGGCTTTCTGACAGTAATACATTTTGCTGAGGTAACGTAAAGTTGGTTTTATATTCACACATTCAGACTTTCTCCTTAATTAAAAAGTATTCTTTGCTGATTTCTAAATAGTGTAATCATATAAGCAGCCAGTGACTACCAAAGTACAAGTTCACAGTTATATAAATGGTGCTAATGTTGTTTTGAAGTCATATTCACATCTGATTTCATACCGAATATCCAAAGTACCATGGTAAACACTATA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
eif2b5zc102/zc102Homozygous♀+/- ♂+/-4 figures with image from Keefe et al., 2020Figure 4 with image from Keefe et al., 2020
eif2b5zc102/zc102; vu19TgComplexFigure 3 with image from Keefe et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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