Genomic Feature
hsc101
- ID
- ZDB-ALT-210615-4
- Name
- hsc101
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Ciruna Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 41470431 - 41470434 (GRCz11) (1) Details
- Nucleotide change
- ACAT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AAGCAAGAGATAACAATGACATATGATGATGTGTGCAGGTCCTTTTATTGCTGTCCTAATCCCTAGGTGTAAATTTTGAAGCCCTTCTCCTTCACACTCTGTTTCAAGGGACAAGGGGAAGAGGTAGGGTTAAGGGTACAAAAATAGAAATGGGATTGGGCCTATTTAGTTCCCTCTTTCCTAATATAGTCCAATCAGCCGCCATACACTATGTAGGGCAGTGTTTCTCAACCACTTTCCTGGAGGTCTCCTTAACCAAACACACCTGATTCAGATCATCAGCTCATTAGCAGAGACTGAAAGACCTGTAATGGGTGTGACAGACACAGGAGACATCCAAAACATGCAGTGCTGGTGGTTCTCCAGGAACGTGGTTGAGAAACACTGATGTAGGGTTTAGCGAATGAGTGAACAAGTGAACGATTTCAAACACATCTCTGCTTTTTCGCACCAGCGAGGGCTGTTCCTTGTGCTGCTGGGCGCTGGCTCCGGTCTGTCCT
ACAT/- GGGGATCCAGAGGGTGTTAAATGAATGGGACGACATCGTGACTGAGCACTGGATGGAATTACTGGGTAACTAGGCAACCTTTCTGTTATAACCCATCTTGCTCTGTTTTTCTTTGCAATCATCTCATCATCCAATTACACCAGACAGTAAGCCTTCGCTAATGTTAATAAATGGTCTTTCAAACGTACCTTATGTACAATCGTGCATGTCAGCCGAATGCCACGTGTTGTCTGTTAATTTGCTTGACGTGTTCTTTCTACAATAGAATAATTACTGCGCATGTCGTTTAGTCAGATTATCCCTCCACTCTCTCGCTGGACGTTTCATCAGCGCTCCAGCATTGCGTAGTAACAGTCTGGAGCAGATTGAGATTCACCTTTTGTATCGTATATCTTGGCTCAGTTAGTGTTATAATATGAGGGCCAAGTATTTCGAAATGCTGAAACGACTGCCTCTTGACTGCTCAATAGACTCTATTCTCTGCCAAATCAATTTCCCTC - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
nemp1hsc162/hsc162; nemp2hsc101/hsc101 | Complex | 2 figures from Tsatskis et al., 2020 | Fig. S6 from Tsatskis et al., 2020 | ||
nemp1hsc162/+; nemp2hsc101/+ | Complex | 2 figures from Tsatskis et al., 2020 | Fig. S6 from Tsatskis et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None