Genomic Feature

hsc101

ID
ZDB-ALT-210615-4
Name
hsc101
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Ciruna Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 9
Variants
Variant Type
Small Deletion
Variant Location
Chr 9: 41470431 - 41470434 (GRCz11) (1) Details
Nucleotide change
ACAT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAGCAAGAGATAACAATGACATATGATGATGTGTGCAGGTCCTTTTATTGCTGTCCTAATCCCTAGGTGTAAATTTTGAAGCCCTTCTCCTTCACACTCTGTTTCAAGGGACAAGGGGAAGAGGTAGGGTTAAGGGTACAAAAATAGAAATGGGATTGGGCCTATTTAGTTCCCTCTTTCCTAATATAGTCCAATCAGCCGCCATACACTATGTAGGGCAGTGTTTCTCAACCACTTTCCTGGAGGTCTCCTTAACCAAACACACCTGATTCAGATCATCAGCTCATTAGCAGAGACTGAAAGACCTGTAATGGGTGTGACAGACACAGGAGACATCCAAAACATGCAGTGCTGGTGGTTCTCCAGGAACGTGGTTGAGAAACACTGATGTAGGGTTTAGCGAATGAGTGAACAAGTGAACGATTTCAAACACATCTCTGCTTTTTCGCACCAGCGAGGGCTGTTCCTTGTGCTGCTGGGCGCTGGCTCCGGTCTGTCCT
ACAT/- GGGGATCCAGAGGGTGTTAAATGAATGGGACGACATCGTGACTGAGCACTGGATGGAATTACTGGGTAACTAGGCAACCTTTCTGTTATAACCCATCTTGCTCTGTTTTTCTTTGCAATCATCTCATCATCCAATTACACCAGACAGTAAGCCTTCGCTAATGTTAATAAATGGTCTTTCAAACGTACCTTATGTACAATCGTGCATGTCAGCCGAATGCCACGTGTTGTCTGTTAATTTGCTTGACGTGTTCTTTCTACAATAGAATAATTACTGCGCATGTCGTTTAGTCAGATTATCCCTCCACTCTCTCGCTGGACGTTTCATCAGCGCTCCAGCATTGCGTAGTAACAGTCTGGAGCAGATTGAGATTCACCTTTTGTATCGTATATCTTGGCTCAGTTAGTGTTATAATATGAGGGCCAAGTATTTCGAAATGCTGAAACGACTGCCTCTTGACTGCTCAATAGACTCTATTCTCTGCCAAATCAATTTCCCTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nemp1hsc162/hsc162; nemp2hsc101/hsc101Complex2 figures from Tsatskis et al., 2020Fig. S6 from Tsatskis et al., 2020
nemp1hsc162/+; nemp2hsc101/+Complex2 figures from Tsatskis et al., 2020Fig. S6 from Tsatskis et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations