Genomic Feature

nju905

ID
ZDB-ALT-201209-8
Name
nju905
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Zhao Lab
Current Source
Other Pages
Notes
Comment Citation
555bp deletion and 1bp insertion in intron3 Zebrafish Nomenclature Committee
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 11: 10450028 - 10450582 (GRCz11) (1) Details
Nucleotide change
CCCCCGGTGCTCCCAAGCATGCAAAGATTCCAGGCCCTGAGACGTACCATATTGACTATAGATTTTATCAATTTCTCACGCGCTTCTGTGCCCGGCTGCCCTTCTTTAATCTTTACCACCGGGACTTCCATTATTGTGATGGCCTGTAAAAATGAAGAATTGACGTCAACCTGGCAACCCAAAAGCTGATAAATTTCACAGGCAGGAAAGCCTTACAACCTGTCAGAACCATGATGAGAACTTCAAACAAATGTCAAGCAAAGTCCAGAAGGAAGTTCTGCTACGTTAATAAGTTGCGTAAGGGCAGGGAGAAAAGATTACTAAAAGCAGTAACTAAATCTCAAGTCTTCTCACGTCTTGTCAAGGGCAAAGAGAGGAGACTTTCAAGGAACATCCTCTTCCTCCCTCAAGCGCTACATAAGACGTTTTCATCCTGAATCTGCACGCATTTCAGCTCATTTATCTAGCTCAGAACAACCTACACGTTGCAACAGTGACCTCGGATCCCTCCAAACACAACCCTCAGAGCAAAGGAAGAACATTCATAACCTCAGG/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted / 555 bp deleted in Intron 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TAGATAGACAGACAGACACCAAGAAACTGCATATGCTTAAATAATAATTAAATAATTAAAAATAATAATGTAATTAGTAATCAGTTACTTTTCTGAAGTAACTTGCTCAACACTGCATGCAAACATATATGAAAGAATTACGTCCGGTGTGATAAAGCCCTTAGGTTTTTTGAAGGGAACAGAAGAGAGATCTGTTAGTCCGGAAACTTTCATTAAACTGGTTATTTGAGATTCACTTTCAAAAATGATTACTCTTACCTGAATGCAAAAACAAATACATCAAAAAATAAACTCAATTTTAAAAAGTGTTAATCAAAGGGTAGATTATATAACAGAGTGAATTAATATTTAATTAAATGGATTAAAGACCACCTGTTGGACAAACACAGAAAACGCTGTTAGAACTTAGTCCAGACCACCATGTGAGTGACTTTGATATTAAACAGCACAGTGCCATACCGAATCCCTCTCCTCCCCGTAACACACCATGCCGCAAATCC
CCCCCGGTGCTCCCAAGCATGCAAAGATTCCAGGCCCTGAGACGTACCATATTGACTATAGATTTTATCAATTTCTCACGCGCTTCTGTGCCCGGCTGCCCTTCTTTAATCTTTACCACCGGGACTTCCATTATTGTGATGGCCTGTAAAAATGAAGAATTGACGTCAACCTGGCAACCCAAAAGCTGATAAATTTCACAGGCAGGAAAGCCTTACAACCTGTCAGAACCATGATGAGAACTTCAAACAAATGTCAAGCAAAGTCCAGAAGGAAGTTCTGCTACGTTAATAAGTTGCGTAAGGGCAGGGAGAAAAGATTACTAAAAGCAGTAACTAAATCTCAAGTCTTCTCACGTCTTGTCAAGGGCAAAGAGAGGAGACTTTCAAGGAACATCCTCTTCCTCCCTCAAGCGCTACATAAGACGTTTTCATCCTGAATCTGCACGCATTTCAGCTCATTTATCTAGCTCAGAACAACCTACACGTTGCAACAGTGACCTCGGATCCCTCCAAACACAACCCTCAGAGCAAAGGAAGAACATTCATAACCTCAGG/T TCCATCAACTCCCAACCGCCACATTCCACATCTTGATGTAAGAATGTCAGTGTAATGCATTTGTTAGCGTACGAGTCCAG  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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