Genomic Feature

pu105

ID
ZDB-ALT-200824-7
Name
pu105
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
GuangJun Zhang Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 1059780 - 1063145 (GRCz11) (1) Details
Nucleotide change
GGGAGAAAGTGGAGGTGGAGGAGCTCAGGACAGCACGTTTGAGTGTAACATCTGTCTGGACACATCTAAAGATGCTGTCATCAGTCTGTGCGGACACCTCTTCTGGTGAGGCCCTCACAACAATAAACAGCTCTTGTTTGCACTGCACACGACATTCAGACATGACTGTGGGAATTTTTAGACCAGCGCAAGCCTAATTTCCACGCTTTGCGCCATTGTTTAAATAGAAAATCCATCCACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGTCTATAGAGGAGGTGTGTTAAGGCGCATTGTTGGAGCGTTGCTATTCTGAGGAGCTAAAATAGACCAACAGCACCATTGACCAACTAAGAGCTGCTCTAGAGTCCAGCAGAGTGTGTTAGTTATGCACATATGCAGGTCTAAATGCTGAACACACACAGGATGATCAGCAACACACAAATATCTCTACAGATGAAAACAATTAAAGGATTAAAATGATCCAGAAATGATGATTTTCACCACTGCCTCCATGCCTTCTTCACCCCGGGGGCTTTTTCAGTTTATTGATGACCATCTGCATCTGTATAATGTGATTATTATGATCAGTATTATTGATTATCTGCAGATTTATACTTGCTTTATTAAACACAAGTGTAGATGTGTCCAGCTGTGGGGTTTTGGAGACGTCTGCATCAGCATATGTGGATAAGAACAGGACGTGTGTTTGGATATAACTCAGTTTTCTGACCACACGTCATTATTATTGTTCATTTATTCCTTTGCTGGAGATTAGAACTGAGTTTAGAAATAGTTTTGAAGCAAATCTTTGCGCCTAACAAAGGAAATTAAATCTGTGGGCTGATGGATGTGTTCAGTGGAGTGAGTTTCCACCGTTTCCTCACTCCACCAAAGTAAAGGAGTAAAGGAATTAAGTAAAGAGAAAGTAAAGAGGCTGAATGGAGGAGGCTCGTTCTTTATCCTCGTGCTGCAGATGCTCTGTTTAACTGTGTTCTCGCTAGTGAAGCGTTCAGCTTTTACACTTACAAAGTCGCCATGTAAATAGCGAATCCGCCATGGAGCGACAAAACTGACTCTAAAAGGGAATGAGAAATGAGACTCTGATTGGTTTAATGCAGGTTTAATCCAAAAACACACTCAGAACTCATTAAGAGAATAAGCACAACCCGGTTAGACCATGCGCAGAGCGGATTTATCCGTCCTTAAAATAGCAGAAGTGGATCCAGACACGCTCTTAGTGCTTAGAGCCCATTATGACAGACATGAAAATGCCATGTTCAACTTTAAGGATTGCCAAGTCTTCAATGTGTTTTAGTGCAAAATAAACAGAAAATCAAAGCTAAATATCTGAACTAAGTATATTCTTAGTTTGAAGTTGATATCTTATTTAGGTGTAGATTTTTGTTTATCCGCAGTACTAGACATGACCACCAGCTGACTATATAATGGTGCCCCCTTTGTCTATGTTGGTCCAGTAAATGACTGCAAATCCAAACACCTTTATTCTTTTCCTTTATTACTGGTTTGTGATTAAAAAAAATTCTGATAAAATTTAACCAATGGCTAAATCTCATCTCACACACAAACACGAACCTCATTGAACAACACTGGAGTACAGCACATCCTGTCCAGCAGTTGCATATGTCTAGATAAATATTGGGAAAATCTTCAAAAAGCTTCTGATCTGTCGTATGTCGTGTGCAGTGGAAAAGAAGTTTAATGCAGACAGTAATAAGGAAACCATGTTCATTTCTTAACACTTATTTCTTTTTCCATCTGCAACGGGATCACAGCTGGCCATGCTTGCATCAGGTGAGTTCTAGAAGAGTGTTAAAATCATTACCATTAGGGCTGTGCAATATAATGATATAAACTCACCGGCCACTTTAATAGGTACACCCCTCTAGTACTGGGTCGGATCCCTTTTGCCTTCAGAACTGCCTTAATCCTTGGTGGCAGAGATTCAACAGTTGGCAATTGGATTGAGCTCTGGTGACTGTGGAGGCCATTTGAGTACAGTGAACTCATCGTCATGTTCAAGAAACCAGTCAGAGATGATTGAGCTTTATGACATGCTGCGTTATCCTGCTGGAAGTAGCCATCAGAAGATGGAGACACTGTGCTCATAAAGGGATGGACATGGTCAGCAGCAATACTCAGGTAGGCTGTGGCGTTGATGCTCAATTGGTACTAATGGACCCAAAGAAAATCTCCCCACACCATTACACCACCACCACCAGCCTGAACCGCTGATACAAGGCAGGATGATCCATGCTTTCATGTTGTCTGAGCCGAGCATCTGAATGTGTCAGCAGAAATGGAGACTCATCAGAGCAGCAACGTTTCTCCAATCTTCTATTGTCCAGTTTTGGTGAGTCTGTGTGAATTGTAGCCTCAGTTTCCTGTTCTTAGCTGACAGGAGCGGCACCCGGTGTGCTCTTCTGCTGCTGTAGCCCATCCGCCTCAAGGTTGGACGTGTTGTGTGTTCAGAGATGCTCTTCTGCAGAGCTCGGTTGTAACGAGTGCTTATTTGAGTTACTGTTGCCTTTCTATCAGCTGAAACCAGTCTGGCCATTCTCCTCTGACCTCTGGCCTTATCAACAAGGCATTTGTGCCCACAGAACTGCCGCTCACTGGATATGTCCTCTTTGTCGGCGCATTCTCTGTAAACCCTAGAGATGGTTGTGCGTGAAAATCCCAGTAGATCAGCAGTTTCTGAAATACTCAGAGCAGCCCGTCTGTCAGCAACAACCATGCCACGTTCAAAGTCTCTTAAATCCCCTTTCTTCCCCATTCTGATGCTCGCTTTAAACTGCAGCAGATCCTCTTGATCATGTCTACATGCCGAAATGCAGCGAGCTGCTGCCGTGTGATTGGCTGATTAGAAATTTGCCTTAACGTGCAGTTGGACAGGTGTACCTAATAAAGTGGCCAATGACTATGTCGTAATGACAAAATGAAAGTAATATTTCAATGTTGCAAAATACATTGTTTACTATAACACTTTTTCATAGTTTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTTTACAGTGGTTAGAGACTCGTCCAAATAGACAGGTGTGTCCGGTGTGTAAAGCAGGCATCAGTCGAGATAAAGTGATCCCACTGTAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
3366 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTAGTACCACTCAATGATCACGCACACGTTATTATCATCAGCTCAACACGTTCATTATTTCAAATAGACGTGTGGCAAGCTCTCTGGAGAAAGTGAAACAGCTCACACTTAAGACAGTCTCCTAAACAACAACAGGACACGGCAGATTCTGCTCTTCTTGGCCTTGTGGCTGTTCATCAAGGCGATGACAAGGTTTGTCTAATGTCGGGTCGACCATGGCTTGTTATTATGTTTATATTGTATTACAGTGTAATGCCGGCTGTGTTTTTAAAACTAGAGCTTCCTTTGTGCTAGTGACGCATCTCTGTAAACCAATAGTGTTCAGCTGCGCGTCTCACTTCGCCTTTTGTTTACCCTTTAGTATAAGCACATCTCATGCATGTGTGTTTCTGTGTTGATGTTTAGGGTTGTGTTTAGTGGAGAATGGCCAGTGCAGCAGCCAGTGAGAGTTCTTCATCATCTTCATCATCATCAGCAGGAGCTGCCAATGGTCAATCAGC
GGGAGAAAGTGGAGGTGGAGGAGCTCAGGACAGCACGTTTGAGTGTAACATCTGTCTGGACACATCTAAAGATGCTGTCATCAGTCTGTGCGGACACCTCTTCTGGTGAGGCCCTCACAACAATAAACAGCTCTTGTTTGCACTGCACACGACATTCAGACATGACTGTGGGAATTTTTAGACCAGCGCAAGCCTAATTTCCACGCTTTGCGCCATTGTTTAAATAGAAAATCCATCCACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGTCTATAGAGGAGGTGTGTTAAGGCGCATTGTTGGAGCGTTGCTATTCTGAGGAGCTAAAATAGACCAACAGCACCATTGACCAACTAAGAGCTGCTCTAGAGTCCAGCAGAGTGTGTTAGTTATGCACATATGCAGGTCTAAATGCTGAACACACACAGGATGATCAGCAACACACAAATATCTCTACAGATGAAAACAATTAAAGGATTAAAATGATCCAGAAATGATGATTTTCACCACTGCCTCCATGCCTTCTTCACCCCGGGGGCTTTTTCAGTTTATTGATGACCATCTGCATCTGTATAATGTGATTATTATGATCAGTATTATTGATTATCTGCAGATTTATACTTGCTTTATTAAACACAAGTGTAGATGTGTCCAGCTGTGGGGTTTTGGAGACGTCTGCATCAGCATATGTGGATAAGAACAGGACGTGTGTTTGGATATAACTCAGTTTTCTGACCACACGTCATTATTATTGTTCATTTATTCCTTTGCTGGAGATTAGAACTGAGTTTAGAAATAGTTTTGAAGCAAATCTTTGCGCCTAACAAAGGAAATTAAATCTGTGGGCTGATGGATGTGTTCAGTGGAGTGAGTTTCCACCGTTTCCTCACTCCACCAAAGTAAAGGAGTAAAGGAATTAAGTAAAGAGAAAGTAAAGAGGCTGAATGGAGGAGGCTCGTTCTTTATCCTCGTGCTGCAGATGCTCTGTTTAACTGTGTTCTCGCTAGTGAAGCGTTCAGCTTTTACACTTACAAAGTCGCCATGTAAATAGCGAATCCGCCATGGAGCGACAAAACTGACTCTAAAAGGGAATGAGAAATGAGACTCTGATTGGTTTAATGCAGGTTTAATCCAAAAACACACTCAGAACTCATTAAGAGAATAAGCACAACCCGGTTAGACCATGCGCAGAGCGGATTTATCCGTCCTTAAAATAGCAGAAGTGGATCCAGACACGCTCTTAGTGCTTAGAGCCCATTATGACAGACATGAAAATGCCATGTTCAACTTTAAGGATTGCCAAGTCTTCAATGTGTTTTAGTGCAAAATAAACAGAAAATCAAAGCTAAATATCTGAACTAAGTATATTCTTAGTTTGAAGTTGATATCTTATTTAGGTGTAGATTTTTGTTTATCCGCAGTACTAGACATGACCACCAGCTGACTATATAATGGTGCCCCCTTTGTCTATGTTGGTCCAGTAAATGACTGCAAATCCAAACACCTTTATTCTTTTCCTTTATTACTGGTTTGTGATTAAAAAAAATTCTGATAAAATTTAACCAATGGCTAAATCTCATCTCACACACAAACACGAACCTCATTGAACAACACTGGAGTACAGCACATCCTGTCCAGCAGTTGCATATGTCTAGATAAATATTGGGAAAATCTTCAAAAAGCTTCTGATCTGTCGTATGTCGTGTGCAGTGGAAAAGAAGTTTAATGCAGACAGTAATAAGGAAACCATGTTCATTTCTTAACACTTATTTCTTTTTCCATCTGCAACGGGATCACAGCTGGCCATGCTTGCATCAGGTGAGTTCTAGAAGAGTGTTAAAATCATTACCATTAGGGCTGTGCAATATAATGATATAAACTCACCGGCCACTTTAATAGGTACACCCCTCTAGTACTGGGTCGGATCCCTTTTGCCTTCAGAACTGCCTTAATCCTTGGTGGCAGAGATTCAACAGTTGGCAATTGGATTGAGCTCTGGTGACTGTGGAGGCCATTTGAGTACAGTGAACTCATCGTCATGTTCAAGAAACCAGTCAGAGATGATTGAGCTTTATGACATGCTGCGTTATCCTGCTGGAAGTAGCCATCAGAAGATGGAGACACTGTGCTCATAAAGGGATGGACATGGTCAGCAGCAATACTCAGGTAGGCTGTGGCGTTGATGCTCAATTGGTACTAATGGACCCAAAGAAAATCTCCCCACACCATTACACCACCACCACCAGCCTGAACCGCTGATACAAGGCAGGATGATCCATGCTTTCATGTTGTCTGAGCCGAGCATCTGAATGTGTCAGCAGAAATGGAGACTCATCAGAGCAGCAACGTTTCTCCAATCTTCTATTGTCCAGTTTTGGTGAGTCTGTGTGAATTGTAGCCTCAGTTTCCTGTTCTTAGCTGACAGGAGCGGCACCCGGTGTGCTCTTCTGCTGCTGTAGCCCATCCGCCTCAAGGTTGGACGTGTTGTGTGTTCAGAGATGCTCTTCTGCAGAGCTCGGTTGTAACGAGTGCTTATTTGAGTTACTGTTGCCTTTCTATCAGCTGAAACCAGTCTGGCCATTCTCCTCTGACCTCTGGCCTTATCAACAAGGCATTTGTGCCCACAGAACTGCCGCTCACTGGATATGTCCTCTTTGTCGGCGCATTCTCTGTAAACCCTAGAGATGGTTGTGCGTGAAAATCCCAGTAGATCAGCAGTTTCTGAAATACTCAGAGCAGCCCGTCTGTCAGCAACAACCATGCCACGTTCAAAGTCTCTTAAATCCCCTTTCTTCCCCATTCTGATGCTCGCTTTAAACTGCAGCAGATCCTCTTGATCATGTCTACATGCCGAAATGCAGCGAGCTGCTGCCGTGTGATTGGCTGATTAGAAATTTGCCTTAACGTGCAGTTGGACAGGTGTACCTAATAAAGTGGCCAATGACTATGTCGTAATGACAAAATGAAAGTAATATTTCAATGTTGCAAAATACATTGTTTACTATAACACTTTTTCATAGTTTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTTTACAGTGGTTAGAGACTCGTCCAAATAGACAGGTGTGTCCGGTGTGTAAAGCAGGCATCAGTCGAGATAAAGTGATCCCACTGTAC/- GGCAGAGGCAGCACCGGCCAGCAGGACCCCAGGTACACACGCACACACACTATGAGTTATGGAGGAATATGATTACTGCT  ...
Additional Sequence
None
Fish
No data available
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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