Genomic Feature
sh214
- ID
- ZDB-ALT-200407-1
- Name
- sh214
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Bandmann Lab
- Current Source
- Other Pages
Notes
Comment | Citation |
---|---|
Homozygotes are viable and fertile. No abnormalities in morphology, ... | Soman et al., 2019 |
Variants
- Variant Type
- Delins
- Variant Location
- Chr 13: 4750196 - 4750213 (GRCz11) (1) Details
- Nucleotide change
- TAGTCTTTGAACCTGCCA/GAAACAAAAGAAGAGGTCATTTGATATTCAATTTTATTAAAAAGTAATTAAACAGCTCCTCTTTCAGGTT
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 70 bp inserted / 18 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AGAAAAACTACTCAATTACAATAGTTTGAGTATTTGTAATTTGTTACTTTACACCACTACTAATAATTATTATTAGGCCATTTATTAAAGTAGTATAAACTAACATTATCACATAAATGATATAAAAACCCAGACTAAATTACATTTGATTACACAAACAGCGGATATAACTAAAGTACATTACATTTATGATCTTAATGGCATCTTCTCTTCAGGATTTTCAGATATTTACTTTAAATCCAATAGTATTTGTTGTGTAAATGTTCAATATTGTTGGTTTGGTTCAAGGCTTTGAACTCTATATTAAAAAAAAAAAATTCTCTGAAATGCCTTCGGAGAAAACTGAAATGAAAACATGTCTCTGAAGTCTATAAGTAGACAGGGTCACAGCAAAGCTCTAGTTTGTAAACCATTCCAGTGATGCAAAAACCTTGCAAGTATTTGCATGTTTTTAAATAAACAAATCATGAAGACTCACCTTCTGCAGCAGGTGAACACAA
TAGTCTTTGAACCTGCCA/GAAACAAAAGAAGAGGTCATTTGATATTCAATTTTATTAAAAAGTAATTAAACAGCTCCTCTTTCAGGTT TGAGGGGGAGCCCTTCCAGCCCTATAATAAAACAAAAGGAGAGGTCATTTGATATTCAACTTTATTAAAAAGTCATTAAACAGCTCTTCTTTCAGGTTAAATCTACCTGGGAATTACAAAAAAAAAATTATAATAAAAAAGTGACTAAAATGGGTGACGAAAGCTGTGAGGAGAAAGTGTAGTGTGTGTGACAGAGCAAAGACAGGAGAGAAAAGGGAGACAAGCACAGGCATCTGTCAGTGACAGGCATCAATACTGACTCTGACAAAACATCAGAGGTAACAAGTGAGGAAACGTAAGATTTTATATTATACTAGGGCTGCACAATATATTGTGAAAGTATTGTTATCGCAAATTACATTTATTTATGTATTGGTTGTTTATATCTAAACTTGACCAATCAGATGAGGCCTCACAAGTAGCTGCTGTTCTGCTATTGGCTGGAGCGGCCCAAAGCTAAACCCATAAACACTGATGGTGGGAACCGAGAGTTCTTTACT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
mcush214/sh214 (AB) | Homozygous | ♀+/- ♂+/- | 3 figures from Soman et al., 2019 | 3 figures from Soman et al., 2019 | |
pink1sh397/sh397; mcush214/sh214 (AB) | Complex | 5 figures from Soman et al., 2019 | 3 figures from Soman et al., 2019 | ||
pink1sh397/sh397; mcush214/sh214; cms1Tg (AB) | Complex | Fig. 5. from Soman et al., 2019 | Fig. 5. from Soman et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None