Genomic Feature
sq10
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 18: 44543189 - 44543190 (GRCz11) (1) Details
- Nucleotide change
- -/TCACA
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- None
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- None
- Flanking Sequence
-
GCACAGGCAACAAAAACAGCTACAGTGTGTTCAAAGCTGAAAATTCCAATATTCTGAAAGGTATAATGAATATTCTGATGGGTATTTTGAGCTGACGCTTTACAGACACATTCTGGAGACACAAAAGATGCATCTAAAATCTTGAAAATCGAGTAAAATTGGTGCCCTTTTAAGAAATGAACCGAAGCAAAAGTTTTTTTTTTTTAGCTTTAGGATGGCGAGCGATTGTAGATGACAGAAGTAGGAAACTCATTAATAATATAATAGTTTTTTTTTTAACAAAGCTTTATTTGTATTTGTATTTGTCAGTAGATTTTTCAATGTCTGAAATTCAAGCATTTAAAAACGTTGATATCAATGTAAATAGGATTTATTTTTCTGACGGTTCTTGCACTGTTAGATGCTCATACTCTTGAATGCTGCTTGTGTCCATCTCTCTGCAGTGAGGGCAGTGTAATAGCTTACTACGAGTCAGAGTTCGCAGTTCCAGCAGCACACGAA
-/TCACA GCAGCAGTGGATCAGGCTGTGAGCAATTTAAGTGAAAAGTACAGTTCCGGTAAAGCACGCAAAGTTTCAGAACAACAAGGATCCCTGGTCCTGGATTCGGTTGTGTCTTCAGGTAATGTAGATTAATAGTATCTTCAATCACTGTTTAGTTTGGATAGATAGATGAATGTCACCAAATCATGTTTAGAAATGTATGTTTTTACTTTAGTTTTTGTAATTCTTTGCTTGTAAAATTATAAATAGTACAACTGTAATTTCCTTAAAAGTAATAGTAGTGTAATACAATTTATTTCAATGAAAATACATCATTTATGTATAAATAGACAGCAAATGTGACCCTGTATCACGAAACCAATCATGAGTGTCAATTTATTTTTAGATTTATTAATAAAAATAAAAGGTATAAAGAGGATTTCCATTGATGCATGGTTTTTAGGGTAGGATAATATTCGGCAGATACACAGCTATCTGGAATGTAATAGTTCATAAAATATCAAAATA - Additional Sequence
- None
Fish
No data available
Supplemental Information
- Genotyping protocol
- None
- Ma, J., Scott, C.A., Ho, Y.N., Mahabaleshwar, H., Marsay, K.S., Zhang, C., Teow, C.K., Ng, S.S., Zhang, W., Tergaonkar, V., Partridge, L.J., Roy, S., Amaya, E., Carney, T.J. (2021) Matriptase activation of Gq drives epithelial disruption and inflammation via RSK and DUOX. eLIFE. 10:
- Lin, Q., Low, L.W.L., Lau, A., Chua, E.W.L., Matsuoka, Y., Lian, Y., Monteiro, A., Tate, S., Gunaratne, J., Carney, T.J. (2019) Tracking genome-editing and associated molecular perturbations by SWATH mass spectrometry. Scientific Reports. 9:15240
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