Genomic Feature
uab141
- ID
- ZDB-ALT-200129-9
- Name
- uab141
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Gorelick Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 22: 12985418 - 12985424 (GRCz11) (1) Details
- Nucleotide change
- TGGCATT/-
- Variant Notes
-
mutation is in the ligand binding domain (LBD)
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 7 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TAGTGGGTGGCCTTTTGTGGCTATTTGAACAATAATAGCTTCTACACTACAAATGTAATAGCGTCAAATGGGATTTTGACGATTTATGGAAGTAGTCTAAAGTGGGCAACTTTAAAACATTTAACACCTTTAATAAGAAATCTGAAAATCTTACTCCTGACATGGTTCTCAGCACAGTAGAGCATATCAGCTGCATGGATGAACTGGTACCCTGAACCTCGAACTCGCAGTTCCGCCTCTGTGTAGCCAAGAACTATTTTACCCCTAAAAAACAGGCAGAACAACATCGCTGATGTTTGTACCATATTATATTGTACAGATGAACATATATAACGTCTTATTGTTTTAATCAACACAGTCGTCCATGATTACTTTGCATCGCAGGCCATTGGGGTGAAATCCAACTTGTGTTTGGTTCTGAATATCATGTTCTTGGTTCGAATCTCCATTATGGAAGGAGGCTGTAGGGGCGTCGCAATGGCAAACAGGGCAAGCTGGGG
TGGCATT/- TGGCCTCCATCATCCAATCGCCTGTTTTGCCCATGCAGGAATTTCAGACGTCCTTGAAAATTCAAAGCCTTCAAGAATACAAGTACAAACAATTACTGGAATATCAATATACAAAAAGGAAAGCATTGAAAGCAATTCCAAACCAGAGTTTATTTGGACTGTAAATTTAAATAAACGTAAATCTTGGCAACTCTAACAAAAGGAGCAAATAAAATACATGTCAATACATTTGCATGAAAGACGTACACAACTGATACACGTAGAATAAATACATATACAGCTGGAGCTGATGATTTTGTTTCTGTGCTTTTGGCAAACCACATCATTTGTCTCTGACTCAATGTGGGCCACAGAGCTCATGTCAGGTCATCTATTAACAAACGCAGTGCAAGCTAGTCAGAGTGTGTCATATGTGGAATTACATGGCGCCTTGTGCAAGGCCTGTTTAAAATAGTTCTACTTATGTAAGGCCACACAACAAATGTCTCAGTTTGTCAATG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ahr1buab141/uab141 (AB) | Homozygous | ♀-/- ♂-/- | Fig. 5 from Souder et al., 2019 | ||
| ahr1buab141/uab141 (AB) | Homozygous | Unknown | 2 figures from Souder et al., 2019 | ||
| ahr1auab139/uab139; ahr1buab141/uab141 | Complex | Fig. 5 from Souder et al., 2019 | |||
| ahr1auab139/uab139; ahr1buab141/uab141 (AB) | Complex | 4 figures from Souder et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None