Genomic Feature

ua5022

ID
ZDB-ALT-191119-1
Name
ua5022
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Allison Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 3271380 - 3271390 (GRCz11) (1) Details
Nucleotide change
ACCGGAGATCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CGCGAGTCATTTTTAATAGATGAAAAATTTATTATATATTTTTTTTCTTATATATATATATTTTTTCTTATATATATATATATATTTTTTCTTATATATATATATTTTTTTCTTATATATATTTTTTTTTCTTATGTATATATACATTTTTTTATATATTTTTTTTTCTTATATATATATTTTTTTCTTATATATTTTTTTTTCTTATATATATATATATTTTTTTTTTCTTTTTATATATATATATATTTTTTTTATTTTTTTTATTTTTTTTCTTATATATATATATATTTTTTTTTTCTTCTTATATATATATATATTTTTTTTTTTTCTTATATATATATATATTTTTTTTTCTTATATATATTCTTATATAATCATTAAAAAATTGTATCTCTTCAGGCGGTTTAAGGAGTACCATCCACTGAGAGAAGAAAGCGAGGGCAGCGGTTTTGCTTCAGGAATAAGCGCAGTACCTTCGATGCTGTGGAGCTTTCTGA
ACCGGAGATCG/- ACTGCCGAGAGCCGTCCACTTCTGCTGGGACGCGTGGTGTGAAAACAGCCATAATGCATCACCTGTACAGTCTCTTGATAAGAAAATTTAACAAGCCTATTAACAAGAGGTCCTTATTGTACTGTAATAACAATGTCATGTGCAAAAATATCATATGCAGCATGAATCGAGTAATCCAAATAAAGTATGGTGGTTGCACATGTTGTAAAAACAGATACTTCTGCTTTATTTGGTCTACAGTCACACTACAAAAAATGCTTCATGTACTGTTTTTATAATTGCTTTAGTCCAAATATCTAAAAAATCTTAAATCTAAAGCATTTTCATGCAAGGAAAAACTTTTTTTTCTGAAAACAAGCTAAATAATCTTTAATGTTTATTTTGCTCATTTTACTAATAATCTTGTGTATTTTTGACATTTGTTTATTTTTTTTCAGACAGACCTTTTTTTTTTGTCTAGAACAGAGATGCCCAAACTAGGGCCAAAGTTGGCCCATGGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
pmelaua5022/ua5022 (AB)Homozygous♀+/- ♂+/-4 figures with image from 2 publications3 figures with image from 2 publications
pmelaua5022/+ (AB)Heterozygous♀+/- ♂+/-3 figures with image from Hodges et al., 20232 figures with image from Hodges et al., 2023
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Supplemental Information
Genotyping protocol
None
Citations