Genomic Feature

tpu1

ID

ZDB-ALT-190809-1

Name

tpu1

Synonyms

uta145 (1)

Affected Genomic Region

itln3 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR1-itln3

Lab of Origin

R�met Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 14: 16345318 - 16345322 (GRCz11) (1) Details
Nucleotide change: GCATC/-
Variant Notes: None

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 5 bp deleted in Exon 2 (1)
Transcript Consequence: Frameshift , Premature Stop (1)
Protein Consequence: Polypeptide Truncation (1)

Sequences

Flanking Sequence: GGATGTAATGTTCCACAACAAACTAAGATAAGTTGCTGAAAATTAAACAGACTTGATGACGGTGTGCTGGCATTTCAGTAATGGGCATTTCCAGCCTTGGGTTTATTTAGTGATTACACACTGAACCAGTGTTGCACAACATGTTAGTTTTACTCCAAATACAAGCTTGGATGAGAGATAAAAGCTGCACACAGTCAGACTGAAGAGAAAAGAGAATTAACACAACAATCTTTATCTTAATCGAAAGTAGACAAGAAATATGCTGCGCTGCCTGTTTGTCTTCGTGTGCCTTTTGCACACAAGTATGTAAACTATGATTATCAATATGGATTTTTGAAGTTCTCATAAACGTAAATGAATAGTGTATTTATGTAAGAGTCATATCTCTGTCTTGTTGCCCACAGTGCTTGGTGTTATGGGAGCTGTCACTCCAAAGCCAATTATTATCAACGGCACCTACATAAACCCAGAATTAGGCAAGTATCATGCTAGGTTGAGGA
GCATC/- GCTCGGAGCTGCCTGCAAATCAAAAAAAATCATGGTGCAACACAGGGTGAGTATTGTGGGAATTTAATTTATTTAATATTTAGATTAAAGTTAGGTTTCGGTGCTGAATGGTTGATCAACCACTCAAAAATACAACAAGATATTAACTTTAATCTCACTGTAAAAAAAAAAAAAACTGTTATTTTAAAAATTTTTTACAGAAATTTATTGTAAAATAACACACATTAAATTACAGAAATTTACCGTACAATAAAAAACAAGGAAAGGTAAAGATAAAATTTAAGGTAAATTTCTGTAATTTAACGGCTGTTATTTTACAATAAATTTCTCTAATTTAACTGCCGTTATTTCACAATAAATTTCTGTAATTTTGTTTTATGTTTTTTTCTGCCACCCCAGCTTTTTTACAGTAAAAAATGGAGTGAGATTTGGTAACCTTTTGGATTAGGCTCCTGTGTGTCATGATCTTTAAATTCTTTTTAGATATACAAAGGTGGTGA
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations