Genomic Feature
as53
- ID
- ZDB-ALT-190423-5
- Name
- as53
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Chen-Hui Chen Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 8: 17084455 - 17085796 (GRCz11) (1) Details
- Nucleotide change
- GTGCTGTGGCACATGTCACCATCCTCAAGTACTTCGCCCACTACATGGAGGAGAATTTGATGGATGTGAGTGCACTCTTAGTCTTAACCCTTATGCTTGTATTCACATTTAAAGTCAGAAGATTTGATTTTATATTCTGGTTTGCATTACAAGAAGTTCTAATGTATGCAATTTATTTTTATTTGATGCAGGGAGGTGATGTGATAAGTGAACCAGATATTCAGAAGACAAGAATATACCTGCTGCAGTGGCTGAAATCAGACAGAGCTTTACTGATGCTTTTCAACGATGGCACATTTCAGGTAAAATTATGACCCTTATTTTCTTAAAAAAACAGCTCTTAATGGGACAGTTCATCCAAAAAGCTATTTGAAACATATGCAGAGTGATATTCAAGGCTCACGATGGTACATTGAGGACTTGAAACAATTGGTGTGTGCAAGAAACTGAACAATATTTATTGATTCAGATTCAAAAGTGTTAGATATTAGGTATAAAAAATAATAACATTTAACAAATAGTAATTTTTTTGCATTCTTTGATAAAAGCAGCATAAACATTGTACTTTTACTCACCCTCAAATCATTCCAAAACCTTTATGAGTTTCTTTATTCTATATACAAAGGAAAAAAGCTGAAAACAAGTAACCATTTACATCCATGGTAGGAAAAACAAATACTGTGGGAGTCAATGATTACAGGTTTTCATCTTACTTTTAAGTATCTTCTTTAGTGGTTGGAAAGAAATGCAAACAGGTTTGGAACAAGTGATGAGTGAATAAATGATGACAGTATTTTCATTTCATGTGAACTGTCTCTTTAACGTCTATTTTGTGGTCAAAAATGACAATAGAAGTTTCATCTTTGGGTGAAAGCATTCCTTGAACACCGCAGTTAATGGCACTTGTGTAAACGTTGGTAGAACTCAATGTAAAAAGCTTCTGTCTAGTGCTCTCAACGCCCATCCGCAGTCATGAGTAGTTATCAGTCAGGTCTGCCTTTGTTCAGATTAAAAAGCTGTGTATCCTATAGCCCTGTGGGAAGAAGAAGGTCACATACTCTGCTGTAATAACATCCTGCATCCTGCGAGAGTGTTTCACGGCAGGAATAACAAAGCTCTTTTTCTTCCTCTCCCAACAGGTGAACTTTTATCACGACCACACCAAGCTCATCCTGTGCACGCAGCAGGATGAGTATCTGCTGACGTACATCAACGAGGAGAGAACGTCCGCTACCTTCCAGCTGAGCACGTTGCTGAGCGCGGGCTGCACTGCGGATCTGCGCAGTCGTCTCGAGTACGCACTCAACATGCTGCTGCAGCGATGCAACTGAGCCGGACAGAT/-
- Variant Notes
-
the variant protein lack the C terminal POLO box domain.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1342 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ATTACTGAAACATATTAGGAGGATATCTAAAGAATTATGTGACTCTGAAAGCTGATGTAATGATGTTAAAAATTCAGCTTTGCCCCTTTAGGAATGTTACATTTCTCGATATCATTATTTTACTGTGTTTTTGATCAAATCAATGCAGCCTTGGTGAGCATAAAAGAACGGTAGTCTACAGTATATTCAATATGATCATTATTATTCCCTCTGATTCCCTTTCCTAGCCTTCAGCGTAGATTCTTTATAATCTTAAGAAAGAAAATTGCACCAATATTCTGCAAATGTCAGCTGCAATGGCATTACAGATGAAAGATTGCAGAAGAGCAAGCATTAGTCATAGACCTCATATATGTGCTTACTGAAACAATCCATGAGCACTGTGTTGCTTTGAAAGTGCAGTTATTGATAATTCTCTTACTTTTTGTCTTTCAGGACTGTACATCAGTATGCTGCCCTCGGTCAGAAGTCTGTTTTCTCTGTTATTGAGGCTCCAGAGT
GTGCTGTGGCACATGTCACCATCCTCAAGTACTTCGCCCACTACATGGAGGAGAATTTGATGGATGTGAGTGCACTCTTAGTCTTAACCCTTATGCTTGTATTCACATTTAAAGTCAGAAGATTTGATTTTATATTCTGGTTTGCATTACAAGAAGTTCTAATGTATGCAATTTATTTTTATTTGATGCAGGGAGGTGATGTGATAAGTGAACCAGATATTCAGAAGACAAGAATATACCTGCTGCAGTGGCTGAAATCAGACAGAGCTTTACTGATGCTTTTCAACGATGGCACATTTCAGGTAAAATTATGACCCTTATTTTCTTAAAAAAACAGCTCTTAATGGGACAGTTCATCCAAAAAGCTATTTGAAACATATGCAGAGTGATATTCAAGGCTCACGATGGTACATTGAGGACTTGAAACAATTGGTGTGTGCAAGAAACTGAACAATATTTATTGATTCAGATTCAAAAGTGTTAGATATTAGGTATAAAAAATAATAACATTTAACAAATAGTAATTTTTTTGCATTCTTTGATAAAAGCAGCATAAACATTGTACTTTTACTCACCCTCAAATCATTCCAAAACCTTTATGAGTTTCTTTATTCTATATACAAAGGAAAAAAGCTGAAAACAAGTAACCATTTACATCCATGGTAGGAAAAACAAATACTGTGGGAGTCAATGATTACAGGTTTTCATCTTACTTTTAAGTATCTTCTTTAGTGGTTGGAAAGAAATGCAAACAGGTTTGGAACAAGTGATGAGTGAATAAATGATGACAGTATTTTCATTTCATGTGAACTGTCTCTTTAACGTCTATTTTGTGGTCAAAAATGACAATAGAAGTTTCATCTTTGGGTGAAAGCATTCCTTGAACACCGCAGTTAATGGCACTTGTGTAAACGTTGGTAGAACTCAATGTAAAAAGCTTCTGTCTAGTGCTCTCAACGCCCATCCGCAGTCATGAGTAGTTATCAGTCAGGTCTGCCTTTGTTCAGATTAAAAAGCTGTGTATCCTATAGCCCTGTGGGAAGAAGAAGGTCACATACTCTGCTGTAATAACATCCTGCATCCTGCGAGAGTGTTTCACGGCAGGAATAACAAAGCTCTTTTTCTTCCTCTCCCAACAGGTGAACTTTTATCACGACCACACCAAGCTCATCCTGTGCACGCAGCAGGATGAGTATCTGCTGACGTACATCAACGAGGAGAGAACGTCCGCTACCTTCCAGCTGAGCACGTTGCTGAGCGCGGGCTGCACTGCGGATCTGCGCAGTCGTCTCGAGTACGCACTCAACATGCTGCTGCAGCGATGCAACTGAGCCGGACAGAT/- GAGGAGAACAGTTGGCCACTGACTCAGCACGAGCTGACGATGTCTTTCAATGCAAGGGCAATGAGGAGGGAATGTGGACC ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None