Genomic Feature

ouc2008

ID
ZDB-ALT-190123-684
Name
ouc2008
Synonyms
  • MT2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Chengtian Zhao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Delins
Variant Location
Chr 23: 20133466 - 20133468 (GRCz11) (1) Details
Nucleotide change
GGG/CTCGCTAAAATGTCC
Variant Notes
mutation sequence details
lrrc23 exon  ...
Homozygotes are viable and fertile.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
15 bp inserted / 3 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CGCCACTTACCAGTAAGCTTCATCTAATATAGAAGTAATCATTTAAAAATGTAAATATTTGCAGAGATATGTAAAAATAAGGTGTTGCACATTGATACATTAAATACAGGGTTGATAACTTTAGTGAGAATCATTAACATGATTGGTGTCTTCACATGGATGAATATCATTAATTATTACCAAAAACATAAAGTATAATTAAAAGTAAATTGAGCAAGTTTTTTATTTGAGAAGTGTTTATCAAACTGGTAGCCCTCCACATTAAACGGTACCCAAGAAGTAGCTCTCAGTTTCATAAAGGTTGGTGACCCCTGCTCTAATGACTGTTAGTTGAAAAATAGTTGAAAAGTTGCAGTTAGAAATTAGAATATCTAAAGTCTACTAAAAAGTGTTATTGAACGAACAAACTTACTTATTTTTAAGATCAAGTCTGACATAGGCATGAGACAGACCATTCCCTGTGCGACATAGCAAAGATAAACTTCTCGCTAAAATGTCCT
GGG/CTCGCTAAAATGTCC TTAGTGGACAAGACTCTAGCTGAGTAAAGAGAGAGACAGAGAGATTCTTAAATGAACTCACGAAGAATCATTTTAATTATTTGGATAAAAATGTTACTAAAATAAGACCAAAGAAAACACATTTTATACCTGATCTCCATCTGATTTCTCTTTCTCTTCCAGATCCTCATTCTCTCCCTCATGATCAGAGTCTGCTTTCAATACCTCATCTTCACCAGAGTCTGACATTATTCTTCTATCTTAACTACCTTGTCGATCAACTTTTCACGGGTTGAAATAAATGATTGGGAATTTAGATCGATCAATTTACATCATTAGCATGCTGGCTAACTTTAGCTTGCTTGTTAGTAACTTAACAGACAGGATGCACTGAAAATAACTATTTTACTTGTAACGTTAAACAATTTATGATCATTTCCTGTAACATTAATAACTCAAAAATTACAAATGGATTATATGATCCCGATGTCCGAACAAGTTTTCTGTCACTCACCTCGCGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lrrc23ouc2008/ouc2008Homozygous♀+/- ♂+/-4 figures from Han et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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