Genomic Feature

rdu1001

ID
ZDB-ALT-181106-1
Name
rdu1001
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Center for Human Disease Modeling
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 27767258 - 27767267 (GRCz11) (1) Details
Nucleotide change
ACGTGGATAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 6 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AACAAAAATGAGGGTTTGCATGCCATAAAGACATTTATCAACCAGTGTATAGAGTCTGAGGGCAAGTAACCATTCCATCAGCTATTCCTACATTTCTTGCGACTGGATTTAATGCTGAGCTCTGCACTGGGTCAAAATCTGTTTTTGTGTATATTATATAGTGCAGGGGGTGTCAAACTTTATTTTAGTTTCAATCTTGCTCCGACACACAAATCGTGTAGTTTTCAAATAAACCTGAAAGATATAACTAACTGGATCAGGTGTGCTTAATTATAGTTAGCTATAGCCCTCTAGGAACTGAGTTTGTAAGCAATGGCTATGGTTTGTTTATGTTTGAAAGATATATACGAACTCTCAACCTTTTTCCGTAAACATGTTTTCTTCTATGTAGTTTTTATAACTCCAAATCCTTTTTTCTGAATCAGGGAGCTGCTGGGTTCACCACTGGTGTGCCGTGTGGTCAGAGGGAGTGGAACAGACTGAGGGTGAGGTGCTGATAA
ACGTGGATAA/- GGCAGTCGTCTCAGGGATACAGCGGGTAGGCACAGAGCTTCCTTTATCAAAGCATTAAGCCTCCATAAATATTGCTTTATGACAGGCAAATTAACTTTTCCATCTTTTACCTGGCTTTTGTATCTCTGCTTCAGCCATGTGATTATTGTAAACGGATGGGTGCTACTATCCGCTGCCGGGCCGAAGGCTGCTCACGGTTTTACCACTTCCCCTGCTCGGCTGCAAGTGGATCCTTCCAGTCCATGAAGCAGCTGGCGCTCCTCTGTCCAGAGCACATAGACAAGGCTGAGGAGATTGGTACGGAATTGCAGAAGAAGAGATGCGATATGATCAGTAAATAATGATCAGGATTGCTGAGATGAGTCTGTGTTTGTTTTGCAGCCGGAGAGGAGGCACGGTGTGCAGTGTGTGACTCGGTTGGAGACCTGTCGGGTTTGCTGTACTGTACTGGATGTGGGCAGCACTATCACGATGCCTGTCTGGAGATTAGTGCTACACCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
kmt2drdu1001/rdu1001Homozygous♀+/- ♂+/-Fig. 6 with image from Tsai et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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