Genomic Feature

umo12

ID
ZDB-ALT-180816-17
Name
umo12
Synonyms
  • Mut 2 (1)
  • zf1082 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Wei Ge Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 20
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 21601094 - 21601116 (GRCz11) (1) Details
Nucleotide change
CCTCTCCCCCATCTTCAACTCAT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
23 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ACATGATGTAAATGTTCAACCAATCACAACAGACTCTCTATAATCACAGCATCTTGTCTGAGCAATCAGACCTCAGTAGAATCTCAGGGAGGAGGGCTTTAGGAAGACCAGATCCCTAAATTAACCTTTTCAGACACAGAGAAAAGAATTGATGCTCTAATTTACTCTATTAAAATTTATTTTAATTATCTACATGTAAACAAAAACACCTTAATGAAATTAAGAACTGTCAAAGTGGCATAATTCAAGTTCTTCAAGAGCTTCCCTTAAAGATTACTGTTCAAAATGAGTCTGCTCAATGCTAATTCACACTGTAATTCTTCCTGCTTTTCTCCCAGTATCGAGGACTGAGAAGTTCACCATGACACACATCAACAGTCCCCCGTTACTGATGCGACAGCTCTGAACTCATCCGCCTTCACCATGTCCGAGTATCCCGAAGGAGACAGTCCTCTTCTTCAGCTGCAGGAAGTGGACTCAGGCCGGGTGGGAGGTCACAT
CCTCTCCCCCATCTTCAACTCAT/- CCTCTCCATCTCTGCCAGTGGAGAATCACCCCATCTGCATCCCATCGCCCTACACAGACCTTGGCCACGACTTCAGCACTCTGCCCTTTTACAGTCCCGCTCTGCTGGGGTACAGCACATCGCCTTTATCGGACTGCTCGTCTGTGCGCCAGTCGCTAAGCCCGACTTTATTTTGGCCACCTCACAGCCATGTTTCCTCACTCACATTGCAACAACAGAGTCGACTTCAACAGAACCATGCTACTAGTGGGACTTGGACCGAACATACACCACATGATCATGTTGAAGAGGAAAACAGGTAGGTTTAAGCTTAATAGTCCATATGTAATGTTCTTAAAGGAATAGTTCACATAATTTAATTTCTGTCACTGTTTACTCACCCTTCACAAGCCTTTATGACTTTCTATTGTCTAAACACAAAATGAGATATCTTGAAGAATGCTTGGAATTCAGTAATTATTGAATTCCATTGTATTTTTTTCTACAATAAATGTCAGTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
esr2aumo12/umo12Homozygous♀+/- ♂+/-
esr1umo10; esr2aumo12ComplexFig. 8 from Lu et al., 2017
esr1umo10/umo10; esr2aumo12/umo12Complex5 figures from Lu et al., 2017
esr1umo10/umo10; esr2aumo12/umo12; esr2bumo13/umo13Complex4 figures from Lu et al., 2017
cyp19a1aumo5/+; dmrt1umo15/+; esr1umo10/umo10; esr2aumo12/umo12; esr2bumo13/+ComplexFig. 4 with image from Wu et al., 2020
cyp19a1aumo5/+; dmrt1umo15/+; esr1umo10/umo10; esr2aumo12/umo12; esr2bumo13/umo13ComplexFig. 4 with image from Wu et al., 2020
cyp19a1aumo5/+; dmrt1umo15/umo15; esr1umo10/+; esr2aumo12/+; esr2bumo13/umo13ComplexFig. 4 with image from Wu et al., 2020
cyp19a1aumo5/+; dmrt1umo15/umo15; esr1umo10/umo10; esr2aumo12/umo12; esr2bumo13/+ComplexFig. 4 with image from Wu et al., 2020
cyp19a1aumo5/+; dmrt1umo15/umo15; esr1umo10/umo10; esr2aumo12/umo12; esr2bumo13/umo13ComplexFig. 4 with image from Wu et al., 2020
cyp19a1aumo5/umo5; dmrt1umo15/+; esr1umo10/+; esr2aumo12/+; esr2bumo13/umo13ComplexFig. 4 with image from Wu et al., 2020
1 - 10 of 16
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 2 of 2
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.