Genomic Feature

pr11

ID
ZDB-ALT-180515-5
Name
pr11
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Burdine Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 17: 4245057 - 4245058 (GRCz11) (1) Details
Nucleotide change
GA/GGGGTGTTTATGGAG
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
15 bp inserted / 2 bp deleted at position 235 in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CAGCAAAATGAATAATAATAAGAATAAAAGGATGTTTCATCCAATACACGCGTGTGTAACTGTGAATCAACTTGAATCGTGACACCAATAAAAGGCATGCAACTTGCATTTCTATGGTAACCTTGTGCACATAAATTTAAACATTCCTTGTGCACGTAAATGTTTTAAATTTAAACAATTGAGTGTTGATGGTGAAAAAAGAAATTCTATAAATTGTCCTTTCTTAATACATGGACTTGCTCAACATGTGATGGCTTCATATATATCCCCAATGACTCTTTATAAAAATGCATTTTCCAAATAAAATAAATAAATAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATGTAAACATTTTATTATAAATAAATAAATTATAAATAGTCACTTTTTAAGTGTGGTCCGTAAGATCCTCACCTTGATCCTGCATAAACCTCAC
GA/GGGGTGTTTATGGAG TGTTTCCTCGTACCCCATATTCAGACACCACACATGGGTCATTAACGGTCTGTTTGCTGGCCTGTTTAAAGATTTTCCACATCTGTGATGGCACTGCGGCATGATGCGATGGTTTGGGTCGACTCCAGAGTCCCATAGAGCTCAAAAACAGCTTTTCTTGCACAAGACCATCATCTTCTGCAGGAGAACAGAGACTGAGGGTCAGAAGACAGGCTCTGAGGAGGACCAAGAACATTATTAGATTATAAAAACAGAGCAAAGAACACACACAGGCTTATAAATGCCAGCTGATCAGCTTCACATGGCCAGAAATCCACATCTGCAAGCTGATTGGTGGAGATAAAGGAGTTGATTGATCAGCAGCAGGGGGTGGTGTCATTCACATGCAAATCAGCTCTTTGATGTTTATAGGCATCAGGTTGCCTGGCAGACACAGCTCTGATTTATTGCATGAAGATTTTGGGATCTGCAATGATTTAATAATTAAAATGAGTAGGGGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations