Genomic Feature

zf1031

ID
ZDB-ALT-180409-5
Name
zf1031
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 39630775 - 39630805 (GRCz11) (1) Details
Nucleotide change
ACTGCAGACCCAGTTTACTTCCAAAGCGTGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
31 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
GGCTGTAGGAAAATAGGAAAAGACTCAACATTTTTATATCTTAGACAGAAAGAGGATCTACAGTAGGTCTGTTTTTTTTCTAAAGCACTGTTTGGAAGATGGTTTGAGTGGCCAAAAAAATCTCCACAAAAGTAACAGCTAAAGAATTGCAGAAGTTAATGAAGCCTTGGGGTCAGAAAGCCTCTAAAACTACAATCTAACATCAACACAAATAGTTTGAAAGGGTTTAAAAAATAAATAAATAAATTATTAAATAAATAAATAAATACATTTCTTTCTTTCTTTCGTTAATATTTTGAGCAAAAGTTCAAAAGAATAAAGAACTTATACTTTTTTATCACCGCTTTTTTGCTCACATTCACCAAAGATTCTAATATATTTTAAATATATTTATGTAATCGTATTTTATTAATGCCCACCTTTAGCATAAAATGCACGGACTTTCTTCCAGAGAGCCACATTTGAGTTGAATATGATGCCCTGCTCATGCATCCCGATGC
ACTGCAGACCCAGTTTACTTCCAAAGCGTGA/- AGTGTACAAAGACTTCCTTAACACGTGATATACAGCTGACGACCTGTGACACAAACACACATACAAAAAGCATCAGAATAATGCATTCAAGCTACATTTGGGTTCATTTGCTTTGAATTATTCTGTAATAAATATATAGTTGCAGCCAACATTATTACCCCTACTGTGAAATTGTTATTATTTTCCAAGTAGTTCCTATTATATTTTTCTTCTGGAAAAAGTCTTATTTATGTTAGTTTGGCTGGAATTTCTTACTTTTTGTTGTTGTTGTTGATTGTCTGCAGAATAAACCACTGTTGTCCAATGGATAATTACCCTGACTTGCCTAGTTAACCTAATTAACCTAGTTAACATGAAGTGAACTGAACTGAAGTGGGCTAAAATAAGTATTATTTTCATAAAAATGGTTTCATTTATCATAAATTCTTATCAGTATAGAGCTAATAGTAAAACCGTATTTGAAATGACAGCTGAGAAATTATGAAATTTCATATAATAAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cyp19a1azf1031/zf1031 (AB)Homozygous♀+/- ♂+/-4 figures from Yin et al., 2017Fig. 7 from Yin et al., 2017
cyp19a1azf1031/+ (AB)Heterozygous♀+/- ♂+/-Fig. 2 from Yin et al., 2017
cyp19a1azf1031/zf1031; cyp19a1bzf1032/zf1032 (AB)Complex2 figures from Yin et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations