Genomic Feature

sh317

ID
ZDB-ALT-171130-1
Name
sh317
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Lab D38
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 22: 15899291 - 15899304 (GRCz11) (1) Details
Nucleotide change
CCAGCCTCATGGCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTTAACTAAATAGCGAGTTTGTAACTATAGCAACAGCCACTCGATCGATAAACCAATACTTTTTTCAATCTATATTCTATTAACACATTACAATATAAGCTAAAACAGTGTTTTATTTCGAATAGTAGCCTATTTGTGTACTGCAAACACATTTATAAAGCATACTATTAACTTTTTTGTGCTCTTAAAATGTTTAAAATCAAAACTAATCGAAATCAACCTGTTTCATTGCAGAGGTGGAAGGATGAACTGGACAGGTCCATGCATCTCAGCTGCATAGCTGACCTATCTAACATGGACAACCTCAACAGAATAACAGACGACGAAGATCTTGACAAGTACCTGGATCTGGAGTTTATACTGGCCAACACTGCAGGTTCTGACAATCTCGGACTCGGCATGGCAGGCGACTACAGAATGCAAGAGTCCAGAAACATGTACAACCCGACTACATACTCGGTGCCTGAGATCAACCCATCACCACCTCCACCGTACACCA
CCAGCCTCATGGCA/- GAGCTTCTGCAGTCTGACATTGACACCTACTGCCAACCGTCTCTCCAGGGAAGATTCCTAGTCAGGCCTGCTTTCCCCACTCAGGACATTTCGGAGTGTATCAAAGTGGAGCCCTGCATGGATAGTTACGGACCTGTACGAGGAATGGTTCCCAAAGTCAAACAAGAGGGCAACGGTGCATGCATGAGATCCTATGAGCAGCCAAGACTAGCCAACTCTCCCCAGGGAGCAGGCAGCATGACTCCCCCACAGAGCCCTGCGGAGCTCATCAACACAGACTGTCAGTCACACTCGCAGATGTGCCATGCCTTAACGTTCAGCCAGAGCTATCAAGGCAACACAGGATTTCCCCACGCAGCACCTCCACAGATGCAGCTGCCTTACCAAAGCACACATCACTTCAGCATGTGCGACGATGGGCTTGCAATGCCCAACGCCAACCAAAGAGTACTTCTGACACCACCCTCATCTCCTCTAGAGCTGGACGCCAAACCAAAGAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations