Genomic Feature
bns33
- ID
- ZDB-ALT-171002-18
- Name
- bns33
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Stainier Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 17: 53314237 - 53314243 (GRCz11) (1) Details
- Nucleotide change
- CAGCTGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 3 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GTTGATCATCAGCGGTCTCTTCAGTTCTGTCACTGAATGTTTCACCAAATTAAATGAGATCAGTGTTCTCTCAGCTTGCCTGGGCTGATGCGCATACACACTCGTTTGGCTTTTCTGGTTAATGAACACACACGGTCCTCCTCTGAGTTATGTCTGGATCGCGCTGCTCTTCTGATGGCCAATCTCCTGAGATGACAGCGACTCTTCGTTTACTAGTTAGTGGACATCAGAGGGGTCACGTGATGTGCTCAGACAGAACAGGCCTCAGCTGATATACGGTGTGTGTTTGAGACGTGAGGAGAGCAGCAGATGTGTGTGTGTGTGTGTTCACTTGACTCATGTGCAGCTGTAGATCTGATGCCGAGTCCAGCTCTGCACTCCACAGCGCACACAGACCTGTACTGAAATGAGTGTGTGTGTGTGTGTCAGAGGGCCAGGTGTGTGTGGACAAGCGCACTCTACAGGAGGAGACGGCGCTGATGCTGGCGGTGCAGGCGCGG
CAGCTGG/- AGTGTGTGAGGATCCTTCTGGAAGCCGGAGCAGATCCTGATATCTGCAACAAGAGCAAAGAGACGCCGCTCTATAGGGGTGAGGAGAGTGTGTGTGAGAGAGAGTGTCTGAGTGAGTGTGCCTGTGTGTGTGTTTGAGAGCTGATGTCTGCTTTGTGTGTGTGTGTGCAGCGTGCGAGCAGGAGTGTGTGCAGATGGTGGAGGTGCTGCTGCAGCGTGGCGCAGTGGTGGACCAGCGGTGTGTGCGCGGTCGCTCCGCTCTGCATGCGGCTGCAGAACGAGGCTGTGTGCAGATCTGTGTGTGTTTGCTGCGTGCCGGAGCCTCCAGAGACGCACGCTGCGCTCAACTCAACACACCCGCTGTAGAGGCCGCACGACACGGACACACACACACTCTGGAGCTGCTCATGCAGAACGGTACTAACACACACACCAGCAATACCACACACACACACACACACACACACACACACACCAGAAGAACCACACACACACACACAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| asb2bbns33/bns33 | Homozygous | ♀+/- ♂+/- | Fig. 1  from Fukuda et al., 2017 | 2 figures from Fukuda et al., 2017 | |
| asb2bbns33/bns33; bns103Tg; sd11Tg | Complex | Fig. 2 from Fukuda et al., 2017 | |||
| asb2bbns33/bns33; bns142Tg; s883Tg | Complex | Fig. 4 from Fukuda et al., 2017 | |||
| asb2bbns33/bns33; bns142Tg; s974Tg | Complex | Fig. 4 from Fukuda et al., 2017 | |||
| asb2bbns33/bns33; s883Tg | Complex | 2 figures from Fukuda et al., 2017 | Fig. 2 from Fukuda et al., 2017 | ||
| asb2bbns33/bns33; s974Tg | Complex | 2 figures from Fukuda et al., 2017 | Fig. 2 from Fukuda et al., 2017 | ||
| asb2bbns33/bns33; s974Tg; sd11Tg | Complex | Fig. 2 from Fukuda et al., 2017 | Fig. 2 from Fukuda et al., 2017 | ||
| asb2bbns33/bns33; sd10Tg; sd11Tg | Complex | Fig. 2 from Fukuda et al., 2017 | Fig. 2 from Fukuda et al., 2017 |
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Supplemental Information
- Genotyping protocol
- None