Genomic Feature

bns101

ID
ZDB-ALT-170921-15
Name
bns101
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 10
Variants
Variant Type
Small Deletion
Variant Location
Chr 10: 7374222 - 7374235 (GRCz11) (1) Details
Nucleotide change
CTTGACATTGGGCG/-
Variant Notes
the predicted truncated Nrg1 protein in mutant animals lacks the Ig-like,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGGGCAGGGTCTCAGGAGGATATACTGTCTTTTAGTTTGATTAAAGATAAATATTCCAAAATTGCTCCAGAAGGCACCTTTTCAAACATTTCACTTAAAATATTTCCCGGATAAAAAGTTCTCTTACATCATTTAAAAATACACATTCTATTAAAATATGCTTCATCGTCATAAATTCTTACACAAAAGTCACAAATAGGTTTTTCTTCCGATTTCAATAAATATGCGCGTGTGAGTCTTGAGTGTACATCGTGTATGTACTACCTGATCGTGTCTATTTTCAAAACTGTCATTATTTCTTTCATTTACAAATAGATTGTACATGTAGAAATAACCTCTCTGGCTCAATCTTATTTGAAGCAACATCTTCAGATTCAACACAACAAGCAAGTTTTTATTAAATAAGCAAGTATAGTTCGTTGTACTTACTGTTTCTTTTTTTTAATCTTTATGCTTTTGGGTTTGTTTTTGCCTGTGAGCTCTTTTCCGTTCTTGTACCA
CTTGACATTGGGCG/- CTGGGTTTCCTGCCAAAATCTCACATTTGAGTACCGTTTTTTTCCCGTCCTCCACTGTCACGCTCCGAAGGTTTTTTAACTTCGGTTCCGCTGGAAAACAAAAAGACACAAAACACAAATGAAGCCATCGGTGCTCACAAGGGTGAAACTTGCAAAACATTTAGCACATTATTAATAATTACAATGTAATTACAATTAAATTCTAACAGAAATCTATAAAGCTTTGAAGTCTTTCCTTTCTTGCACAAACTATTAAATTAGATACTTTGGGTATCTAAAGCAGACATTGCTGCCCTCAGAGATGAAATGAATCCTTTCTTATTGTACATTTGTTATGATAGATCCCTTCAGTTAGCTATTTAATCACGAACCACAACCATTACACTAACATAAAGCGAAAAAAATAAGAAAGAAAACGTAACGTCTCCATATTTGAGATGATTTATGATGCCATGAAGCTGTCTAGTTAAATGCGATGCACTTTGTGATTCAATTTGTGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nrg1bns101/bns101; s974TgComplexFig. S1 with image from Rasouli et al., 2017Fig. S1 with image from Rasouli et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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