Genomic Feature

hg61

ID
ZDB-ALT-170809-27
Name
hg61
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Insertion
Variant Location
Chr 17: 654813 - 654814 (GRCz11) (1) Details
Nucleotide change
-/ATCT
Variant Notes
Insertion 4 bp in exon 2, cDNA: 200insATCT,
p. R67HfsX21.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp inserted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TCTGCTCATGATTATTGAGCAAGCTCATACACGACACACAGAAAGTGCAATGAATGAGAAGGCATGTAGAGATCACACAAATTCTAGATCAAGTCATTTCAGCATGTCAAAGTCATATTTATGTGTATGAAATAGTTTCCCAACAATAAAACTGTGGCTAGTGAAAATGGCGAGTGGCTAGTCATGTTGGAAAGCTACTAGCCACAGTGGCTGGTGGTCAAAAAAGTTAATGTCAAGCCCTGGTTTTTACTGCAGATGTCACGTCCAGCTCGCCTCTGTATGATCAGCTCTTGTTCTGTGTATTGCCTCCTCTTGTTGAGTTGCTGAATGCCTCCTCAACTATAGGTGACTTAATGGCTAAATGTAAACTGTAATGTTCCTCCACTCAGCCGTACGCTGCTGCTGCAGATGATGATGATGATGATGATGATGTGTTGCTGGTGGCGGTGTGCGAGGCCGAGCGCAGTGCAGGGGATCTGGGCTTCGACTACTCCGCCGGCC
-/ATCT GTGTCTGGATCTACCCCACCAACCTGCCGCTGAGAGAGTACCAGCTGCGAGTGTGTGAGGCGGCGCTGCTCCAGAACACACTGGTCTGCCTGCCCACCGGCCTCGGGAAGACCTTCATCGCCTCTGTGCTGATGTACAACTACTACCGCTGGTTCCCCGCAGGCAAGATCGTCTTCATGGCGCCCACCAAACCCCTGGTGGCGCAGCAGATAGAGGCCTGCTACAGGGTGATGGGAATCCCACAGGAGCACACGGCGGAGCTCACAGGTCACAAATACTGTTAGAGTTGTCCTGATTGTTCTGAACTGTGTTTGTGGCATGATATGCACTGCCTGACAGTAGACTTGTGGTGGATCAGCTGTAAGAGCAGCAAATAATAACTGGTCTTCTAGTTGATCATTTGTAAAAGTGTCAGAAGGTGGAATTCCCGTGTTAAACTGCATCCACAAGACTTAAGTCAGGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
fancmhg61/hg61Homozygous♀+/- ♂+/-Fig. S10 from Ramanagoudr-Bhojappa et al., 2018
fancmhg61/+ (AB)HeterozygousUnknown
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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