Genomic Feature

mb5

ID

ZDB-ALT-170321-12

Name

mb5

Synonyms

None

Affected Genomic Region

smyd1a (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR1-smyd1a

Lab of Origin

Du Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 5: 72118561 - 72118570 (GRCz11) (1) Details
Nucleotide change: TGAGCTCCTT/-
Variant Notes: None

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 10 bp deleted in Exon 3 (1)
Transcript Consequence: Frameshift , Premature Stop (1)
Protein Consequence: None

Sequences

Flanking Sequence: TCAGATGATGAATCCACTAGAGGGTGCTGTCTGCATTTTTGTATATCTGAAATATGTTTCTTAAGGTACATTTAGTTGTACTTTTCAGAAGACGAATGCACTAGAGGGTGCCGTCTAGATTTTTGGCAATCTAAAATATGTTATAAGAGTACATTTTGTTGTGCATTTCATGTGAAGAATCCACAAGAGGGGGCTGTCTACATTTTCTATCTTTTATTAATCGATGAGGTCCCTGTAAATATCATTAGTGTGAAAAGGAAAAGGAAGTGGTTGGTGTCATACTGCCCCTAGTGTTTATTTCACATAGAAACTGCTGTCAAATTGTGTGCTGAAGCACATTTTTGCAGTTTCACTAAAACATAAGGCTGAATTTCAACCGCATTTCCAAAAAGTCCATGTTGGATGTGTGCCTACCACACCGAAGAGATGCGACACATAATCCTCTCCCACTGCTTTGCTTTTCTTAGGCCAGTAGGTGTAGAAGGTTTTCACATCCACTT
TGAGCTCCTT/- CAGGTCCTCGGGGGTCATTCTGGAGAGATGATCCTCCAGCATATCTAGGGTGGTGAGCTGAGAGTCCGAGACCAGGCCGGTGTGTTTCTGAATGCGCCACAGGATACGAGCAACCAGACTGAAAACACAGCACATAATATATGAGAGGAATCATAGTAATGGAACAACCGAAACCATTCACCATTCCCAAAAACACACTGTAGATGAAGAGCATCTACACTCCCTGACAAAAGTGTTGCTGCTTATCCAAATTGTAGGAACAGCAATAATAACTTGCCTTCTAATCGATGATTTGGTGTCAGAAGTGTCTCTATGAAAGGTGAAGGCCTCTAGATGAGCTCAATAAATCTGATCATGTCTTGATGTTGACTGATTTGATGAGGACAGTGCGCTCTGACTCTGCTCAGACTAAAGTGTCATCACTGAACAGAAATAATGTCCAGTATAGAATATAAAGTCCTGCTGCAGTGGAGACAGAATGAATATTGTGTCTGACTCCA
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations