Gene

smyd1a

ID
ZDB-GENE-030131-9825
Name
SET and MYND domain containing 1a
Symbol
smyd1a Nomenclature History
Previous Names
  • smyd1
  • sb:cb405
  • wu:fc09a05
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have histone-lysine N-methyltransferase activity. Involved in striated muscle cell development and thigmotaxis. Localizes to M band. Is expressed in fin; heart; musculature system; and somite. Orthologous to human SMYD1 (SET and MYND domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
30 figures from 12 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smyd1a Human Ortholog
No data available
Associated With smyd1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR002893 Zinc finger, MYND-type
Family IPR050869 Histone-lysine N-methyltransferase
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Homologous_superfamily IPR046341 SET domain superfamily
Domain Details Per Protein
Protein Length Histone-lysine N-methyltransferase SET domain SET domain superfamily Tetratricopeptide-like helical domain superfamily Zinc finger, MYND-type
UniProtKB:A0A8M1PGA4 485
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smyd1a-201 (1) Ensembl 6,821 nt
mRNA smyd1a-202 (1) Ensembl 1,195 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations