Genomic Feature

lv1

ID
ZDB-ALT-170117-11
Name
lv1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Darras Lab
Current Source
European Zebrafish Resource Center (EZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 16875096 - 16875104 (GRCz11) (1) Details
Nucleotide change
CCAAACTCT/-
Variant Notes
In-frame deletion of three conserved amino acids: proline, asparagine and  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
9 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Deletion (1)
Sequences
Flanking Sequence
ATTCAGAGGCAAAATAACGTCAGAGACTTTTTGGCACAAAAATTGGATGAGTTATACTTGTGTTTACAGTTGTGTGGTAAAGTTCAAATGCTCCTACAATGTAAGAGAATGGCATTATCATAAGCATCTTACTACAAACAAAAATCCAGCGTGAGATCAGCAAGATTATAAGCTCTACTTTTTCCATAAGATGCTTAAAAGTTCTTACAGATGGTGTTAGAAGGGGAAAGAACAAAACCTCATTATCAGTTTAGAGCAGTGACAAAGCCCTCAAGAATATGAAGGATGTTTTTAATACTCATGCAACTGTGAATGTGAAATGTCAAACCTGGTGACATCACATAAGTATCCATAACAACAGAGGCCAATAAACCCAGCTAAAGTGGAATAGTTTTCAGTGTAGTCATGCCTCAACTTTGGTTGGCCATGAGCCAGTGCTCAAATGTATTAACATGTTGATGTTGGATTGTTTTGTTCAGGTGAAATTGGGCGAAGCTGCT
CCAAACTCT/- AAGGTGGTGAAAGTCACTGGCATCAATAGATGCTGGAGCATCAGCGGTAAGACCCACAACCAGTGCCACCTGCTGGACTTTGAGTCTCCTGATCGCCCGTTAGTGGTCAACTTCGGTTCGGCCACTTGACCCCCCTTTATAAGCCAGCTGCCGGTCTTCCGGCGGATGGTGGAGGAATTTTCAGATGTGGCAGATTTCCTGCTGGTCTACATCGATGAGGCTCACCCTTCAGACGGCTGGGTGGGTCCTCCCATGGAGAACTTTTCGTTTGAAGTGAGGAAACACCGAAATCTGGAGGAGAGGATGTTTGCCGCCAGGACACTTCTGGAGCATTTCTCCTTGCCTCCTCAGTGCCAGTTGGTGGCCGATTGCATGGACAATAATGCCAACATAGCCTACGGTGTGTCCTACGAGAGGGTCTGCATCGTGCAGAAGAATAAAATCGCTTACCTTGGGGGTAAGGGTCCATTTTTTTACAACCTTAAAGATGTTCGGAGGTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations