Genomic Feature

ihb141

ID
ZDB-ALT-161117-6
Name
ihb141
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 42146463 - 42146466 (GRCz11) (1) Details
Nucleotide change
GAGA/-
Variant Notes
4 bp deleted between 719 bp to 722 bp of the wild-type trpv1 coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted from position 719 to 722 in Exon 5 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATTTGATTTTTGAACATGTATCTGTATTTGTGAATGTATAATATCATCTTTGCTTCAAATTACAAAAAACAAATTCTGACTTGTACGAGGGGTTTCTAATGCAACGTCTATGGGACAGGACAGTAAATGTGGTGTTATTCTCTCTTCTTGAGGTCGTCATCAGTCTCACACAATTTTTTCCCTTTTTTTGAAAGCCTTGATAACACTATGGAGGAGTTTTTCTTTTATTATTTCAGCAAATAAGATTGTAAAAAAATATTTGTTGTATTCTCCCATTTACTGCACTCTAAGTTTTCCCAACTATGACGACTTCCACTACTGAGAAACCAGGAAATGTGAAAAGGGTTTATTGCTCTCAATGATTGTGACTCATCACTGTTGATACTTAAGCTTACCTTTTGTCCACAGGTGAGCTGCCCTTGTCACTGGCTGCTTGCACTAATCAGCAAGACATTGTGGACTTTCTTATGGAAAACCCTCACCAGGCGGTGGATGTCAGG
GAGA/- GGGACTGTCATGGAAACACCGTGCTTCACGCTTTAGTATCCGTAGCTGATAATAGCCCTGAAAACACAGAGTTCGTCATCGCCATGTATGACCACATCCTAATCAAAGCTGACCAACTTCACCCCAAGACCAAGTTGGAGGAAATTGAAAATAATGAGGGACTGACCCCAATCACACTCGCTGCCAAAAAGGGAAAACTAGGGGTAACTATTTTTTCTGATGTTTTCTGAATTTTAAATGTTTTAGAATATGAAAGCTATGGTTTGCAAATCAGTTTATTTGAAGAAGTGACTCATTTGAAGTAGTCTGCATGCTTTACGTTCTGTATTTTGTTTTTGGATGTTCCCTTTTTTGTAGAGATGAGTAGTCCTCATGTGATTTACGATGCTATTTTTTCTTCTGACACCAAACTGATTCATAGTCATGTGGTCTACAGGGACCGTCATAACCGTTTTCTGAAGAGTTCACACAAAAATAAAAATTCAGTTATCATTTATCCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations