Genomic Feature
um80
- ID
- ZDB-ALT-160721-13
- Name
- um80
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Lawson Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 6: 9439543 - 9439619 (GRCz11) (1) Details
- Nucleotide change
- TCAGAATAAGCCCCGCTCTGAGTTTGTTGTGGCTGAGTATGATAAATACTTCGAGGTGAGTGTTATTATTTGAGGTC/GAATAAATGTTTCTTTTCTTTTAAA
- Variant Notes
-
77 nt deletion/25 nt insertion. Deletes exon 8 splice donor site.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 25 bp inserted / 77 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTTTCGGCAGAATCTAATAGTATATTGTGGTACAGAAATTCAATAAACAAATGTAAATTAAAACTCTATAGTCTTCATTGTATAATTAAACACTGATAATCTTTGTTAAAGTGAAATGTCATCTATCCAGATGGTTGAAATTCACTTAATCCTTCGATGTGACATTTTTAACGCAAAAATGAAAATTTCTGCACCATTTACGAACACTAAAGTTGTTCTAAACTTCTTTTTGTTAAACATAAAACAAGATAAGCAGCCACTGCTATACATAGTACTAACAAAATGTACAATGGAAGTCAATGGCTGTTTTTCCCCAACATTCTTCAGTATGTCTTCCTTTGTGTTCAACAGAAGTAACAAGTTGGGGATTTGTAAATCATGACAGAATTTTAGTTTTTTTTTTTTTGTGAATTCTTCCTTTAGTGCTGTAGTAAACGTCATCTGTTTGTTTGTCTTCTTGTTCTCCAGGAGAGAAGATTACACATGTATGTCATCTACTG
TCAGAATAAGCCCCGCTCTGAGTTTGTTGTGGCTGAGTATGATAAATACTTCGAGGTGAGTGTTATTATTTGAGGTC/GAATAAATGTTTCTTTTCTTTTAAA TCTTTTGGAATAAATGGCTCTGTTTGTTGAAGATGTTGCTGTTTTTTTTTGTTTCGTTAGGGGGTGCAACAGGAGATCAACTCCAGACTTGCCATCAGTGATTACCTGATCAAGCCCATTCAGAGGATCACCAAATACCAGCTCTTGCTCAAGGTATCAGCCATACATTAACCACTACAGTACATATCATGTTAAACAGATTCCAGCAAAGACATAGAAGGTATAAATTAAGACAAATATATTTATTTTATGCAATTATATTCAGGGGTGCACAGAACGTTTTGGTCTGGATTGGTAAAGGAGTACTGAAGTCATATTCATATAAAATTGGCGATTAAAATATACTTATAAATTGCACAAATGTGACAAGTATTTTAATACCTTTTGAAATCTTGTATTTTAAATATGTGATTTGCTTATATTTCTGTATGTCAGATTTCTGTTTGTGGTATGAAATGCTCTTGCGCTTTGGTTGGGGCGTTTCAGTAGGCATTGAAATT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None