Genomic Feature
bns1
- ID
- ZDB-ALT-160511-1
- Name
- bns1
- Synonyms
-
- bn1 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Stainier Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| p.Glu61Metfs*54 | Rossi et al., 2016 |
| 10 bp deletion, resulting in frame shift beginning after glutamine Q60 and a ... | ZFIN Staff |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 4309248 - 4309257 (GRCz11) (1) Details
- Nucleotide change
- CGGGATACTC/-
- Variant Notes
-
p.Glu61Metfs*54
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp deleted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- at position 113 (1)
- Flanking Sequence
-
TATCTTAAAAGGCAGGTAATAAACCAATAGTTTTAGTAAGAACTGGTCCCCATACTGAAGTGTTACCAATTGTTATACAATGATTCGCCTAATTACCCTAACCTGCCTAATAAACCCAGTTAAGTCTTTAAATGTCACTTTAAGCTGGATACTAGTGTGTTGACAAATTTCTAGTCAAATATTATGTGCTGTCATCATGGCAAAGATAAAAAAAATAAGTTATTAGAAATGAGTTATTAAAACTATTATGTTTAGCAATGTGTTGAATAAAATCTTCATTTCATTAAACAGAAATTGGGGAAAAAATATACAGGAGGGCTAATAATTCTGACTTCATTTGTGTATATATATATATATGCACATGCTGGATTAAAGCTGTCTCACCTCCATAGTGACGTTTCGTGTCTCTGTCGGGACGCATTCGAGCGCCTCATCATTACAGCATCCTGCACAGCGCATGAGAACCACACAGGACGGGATGTACGTGTGCTCGATCTCAT
CGGGATACTC/- CTGGATGATGTCTACCAGCAGCTCTCGGGTCTTGCACGCACTCTTTTTATACACATCCATGAAGGGAATCACTGAGGAGGAAGCAAAGCGAGAGTGTTCAGTTACCGTCACACCGTTCTCCCGTTCAACTAAAGTTCTCTCAATGTTAACTTACCTTTGTGTCATTCCAAACCTGTCTGCTGTTATTAATTATTTTCTTCTGTTAAACACAAAAAGAGAGTTTTACAGCGACTCTTTTCCATGCATGACTGTTCATTCATTATTAACCATGACTGAGTCTGTTACTGCTTCGAAAAGTCTTTACCCTTGTGGAAAAAAATGTGCTGAAAGGGGCAGTTCATCCAAAAATGAACATTTACTATTTACTCGACCTCAAGTGGATATAAACCATTTATGAGCTTCATTTTTATGTTGAACACAACAGAAGATATTTTAAAGGAGGATGAAAACCTGTCGACTTACATAATAGGAAAAGCACATCCAATGGAAGTCAATGGTTA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None