Genomic Feature

vu600

ID
ZDB-ALT-160413-5
Name
vu600
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Chen Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 49796579 - 49796600 (GRCz11) (1) Details
Nucleotide change
CAGATACCATGGACAGGCCACA/-
Variant Notes
22 bp deletion in exon 3 of gcgra resulting in readingframe shift and premature  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
22 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GTGGCTAATATTTCTGACATCAACTGTATTTATAAAAATGTTTAATATGTCTACATAGTTACTTATGTTTATTTGAAATATATTAAATATTATAAATACTGCTTTGGTAACTGGCTGAAATAATAAAGTTATTTTCAAAATGATTTTTTTAAGTAAAAATGTTAACTACAGTAACCCCCTGTTCAATAACTATTGTACTTTGCTACTATAGGCAATCATTTAAACTGAAATAGTTTCAATCATATTTAATTTCAAACTTGTTCAGACGAAAACAGCTTTTATGTTTGATTTTTGCTCTTGTGACAAAATGTAAACTGTTACACTAAAAGTTAATGATTTCTAACAAACATTTTTCACATTATACAAACTGTGAATGCTAAATAGCTCCAACCCCAATTATCGTTTATATTTTTAAGAGTAACAATAGCGTTGATTATGAAGTAAAATTTAACGTAATAAATGTGAATACTTCCAGTGCCCTTACCCTCCTTGTGCCAGGG
CAGATACCATGGACAGGCCACA/- CTCACTGTAGTGTTGGGCAGGGCATCAGGCCAGCAGGCATACCGGTCAAACGTCCTGTTGCACACCACACCTGAAGAGCAGACATTAATGTTACCTTCTCTGAGTCTCTGCATGCTGTGACCTGCAATCTGAGGTCTGCTCAGTGTTTCCTAACAGCACTGTGACTCACACTGCTCCCTGTGGAAAGAGGCTCAGCAGCTCACCTGTCATCGGTGCTTCTCTGCTCATATTTCGAAAACATTCATCTCGGTACATCATCCATCTTTCCATCATAGTTTTGAGGGATACAGCAGAAGACACCTGTAAAGTCCAATCAGGCAAAGGTTAACAGTAGCTATGCTTCCACCCACATATTTTGATGCACATTTTGTAAAATCAAATAAAATACATTTTGAAAATGTGCATAAAAAACTAAAATGGATATAAAAAAGCACATCATGTTTATCAAAAAGATCATGGGATTTTGTTTAAACAGATCATGTGATAACAAAACTGGGCAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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