Genomic Feature

fu47

ID
ZDB-ALT-160413-3
Name
fu47
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Lecaudey Lab
Current Source
Other Pages
Notes
Comment Citation
fu47 has a single-nucleotide deletion in yap1, resulting in a frame-shift and  ... ZFIN Staff
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 37351472 (GRCz11) (1) Details
Nucleotide change
G/-
Variant Notes
fu47 has a single-nucleotide deletion in yap1, resulting in a frame-shift and  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAATTGCAGTTTACACAGAGTTGATAATGGTAGCATTTTTCAAAAACCTGCCATTTTTTCAAACATTTGCACTTCAAACTGCCTTCATCATGTAAATGAACTGCCAAAATACATAAAAACTAGTCATGTAAAAAAGTGACACCTCAAAGTCTAATTGAAAGACAAGTTTCCACTTCTAAAATGACCAGCAGCATTTCAGACTTAACCCCATTCTAAAACTTACCAAAACAAATTAATCACCCCTAACCCATGATGCTGTAGTACGCGTTATATCAAGCAACATTAACAACTCACTTTAGGAAGTATCTCTGTCCCGAAGGGGTCTTGGCCATCTCCCAGCCTGGGGGCAGCGGCATGTCATCAGGTATCTCGTAAGAGGACTGGCGGAGGTGCTGAGGTGGGGCGTTTGCTGGACCCATGCTGGTCAGTGCACCAGGAGAAACTGCGCCCAGCTGCAGGGAGGCAGGTGAGGAGTGTGCCCGGACGTGATGGGGCGTGAC
G/- GTACCAGCAGTACCTGCATCTGTACTGGCCTATACGGGGATAGAGGATTAGTTTAGCATAAAGAAAACATTTAGACTAGGATTGGATTTAAAGCAAATACCCCACAGGCAATAATTCTCTCAAACAGAGAACAGACTTATGACTAAACCTAAATAATTTGCACAATTTGCTCTCTTGCTTTACTCTCCCTCAAGTGGTTCCAAACTTTTATAAGTTTCTTGAACACAAAGTAAGTTATTTTAAATGTTAATTATGTCAGAAAGCTGTAACCACTGACCTCCATGGTATTTGTTTTTTCTACTATTGAAGTCAGTGCTTACAGGTTTTTAAAATGTCTTCTTTAATGTTAAATAGAAAGAAAAAAAATCTCAAACAGGTTTGTGATAATTAAAGAGTGAGTAAATGATGACAGAACGCTCAATTTTTGATGAAGTGTCCAATTAAAGTCAACAATTTGTTTGAAAACATTCATTTCGACTTTTTTCAACTAGTCTATGAGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
yap1fu47/fu47; zf106TgComplex2 figures with image from Agarwala et al., 2015Fig. 5 with image from Agarwala et al., 2015
yap1fu47/fu47; zf106TgComplex2 figures with image from Agarwala et al., 20152 figures with image from Agarwala et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations