Genomic Feature
chi3
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 8: 53873726 - 53873733 (GRCz11) (1) Details
- Nucleotide change
- CTTCAATG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Ile>Stop (1)
- Flanking Sequence
-
TCAGCAGTTTCTGAAATACTCAGAGCAGCCTGTCTGGCAGCAACAACCATGCCACGATCAGAGTCTCTTAAATCCCCTTTCTTCCCCATTCTGATGCTCAGTTTGAACTGCAGCAGATCCTCTTTACCATGTCTACATGCCGAAATGCAGTGAGCTGCTGCCATGTGATTGGCTGAGTAGACATTTGCGTTAACGAGCAGTTGGACAGGTGTACCTAATAAAGTGGCCGGTGAGTGTAAGCCATTATCATTCTGACACTGTTATTTTCATTGTCTGACAGTCGTGTAAACACTATCGTGGAGTTTTTCTCCTATTGTTTGAGTGCAAACAGTATATTTGTTGTACTCTCCCATTCACTGCACTCTAAGCTTACGAACTATAACGATTTCTGCAGCGAAGAAACACGCAAATCCGAAAAGTGTGTTATGCATCTCCATACTGTGTTAATACTCACCCGAAGGCCGTGTAGTGCAGCGCCGCGTCTCCGTCCTCATCTTTAG
CTTCAATG/- CTACTGTTAGCCTGTAGCAGGACCTTCACCACCTCTACATGACCCTGATGAGCTGCGACCTGCAGAGCCGTCTTTCCCTGGTTCTTAATGTCCACCTAAACACACACACACACACACACACACACACACACACACACACACACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCATTCATTCATTTATTCATTCATTCATTCATTTATTCATTCGTTCATTCATTTATTCATTCGTTCATTCATTTATTCATTCATTTAATCATTCATTTATTCATTCATTCAATCATTCATTCATTCATTCATTCATTTATTTATTCATTCATTCATTTATTCATTCATTCATTCATTCATTTATTCATTCATTCATTCATTTATTCATTCATTTATTCATTCATTCATTTATTCATTCATTTATTCATTAA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
mib2chi3/chi3 | Homozygous | ♀+/- ♂+/- | 3 figures from Mikami et al., 2015 | 3 figures from Mikami et al., 2015 | |
mib2chi3/+ | Heterozygous | Unknown | 2 figures from Mikami et al., 2015 | ||
mib1ta52b/ta52b; mib2chi3/chi3 | Complex | Fig. 5 from Mikami et al., 2015 | Fig. 3 from Mikami et al., 2015 | ||
mib1tfi91/tfi91; mib2chi3/chi3 | Complex | Fig. 3 from Mikami et al., 2015 |
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Supplemental Information
- Genotyping protocol
- None
- Sharma, P., Saraswathy, V.M., Xiang, L., Fürthauer, M. (2019) Notch-mediated inhibition of neurogenesis is required for zebrafish spinal cord morphogenesis. Scientific Reports. 9:9958
- Mikami, S., Nakaura, M., Kawahara, A., Mizoguchi, T., Itoh, M. (2015) Mindbomb 2 is dispensable for embryonic development and Notch signalling in zebrafish. Biology Open. 4(11):1576-82
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