Genomic Feature

chi3

ID
ZDB-ALT-160314-2
Name
chi3
Synonyms
  • cd3 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Itoh Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 8
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 53873726 - 53873733 (GRCz11) (1) Details
Nucleotide change
CTTCAATG/-
Variant Notes
This allele is the result of an 8 bp deletion in exon 6 of the mib2 gene,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Ile>Stop (1)
Sequences
Flanking Sequence
TCAGCAGTTTCTGAAATACTCAGAGCAGCCTGTCTGGCAGCAACAACCATGCCACGATCAGAGTCTCTTAAATCCCCTTTCTTCCCCATTCTGATGCTCAGTTTGAACTGCAGCAGATCCTCTTTACCATGTCTACATGCCGAAATGCAGTGAGCTGCTGCCATGTGATTGGCTGAGTAGACATTTGCGTTAACGAGCAGTTGGACAGGTGTACCTAATAAAGTGGCCGGTGAGTGTAAGCCATTATCATTCTGACACTGTTATTTTCATTGTCTGACAGTCGTGTAAACACTATCGTGGAGTTTTTCTCCTATTGTTTGAGTGCAAACAGTATATTTGTTGTACTCTCCCATTCACTGCACTCTAAGCTTACGAACTATAACGATTTCTGCAGCGAAGAAACACGCAAATCCGAAAAGTGTGTTATGCATCTCCATACTGTGTTAATACTCACCCGAAGGCCGTGTAGTGCAGCGCCGCGTCTCCGTCCTCATCTTTAG
CTTCAATG/- CTACTGTTAGCCTGTAGCAGGACCTTCACCACCTCTACATGACCCTGATGAGCTGCGACCTGCAGAGCCGTCTTTCCCTGGTTCTTAATGTCCACCTAAACACACACACACACACACACACACACACACACACACACACACACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCATTCATTCATTTATTCATTCATTCATTCATTTATTCATTCGTTCATTCATTTATTCATTCGTTCATTCATTTATTCATTCATTTAATCATTCATTTATTCATTCATTCAATCATTCATTCATTCATTCATTCATTTATTTATTCATTCATTCATTTATTCATTCATTCATTCATTCATTTATTCATTCATTCATTCATTTATTCATTCATTTATTCATTCATTCATTTATTCATTCATTTATTCATTAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mib2chi3/chi3Homozygous♀+/- ♂+/-3 figures with image from Mikami et al., 20153 figures with image from Mikami et al., 2015
mib2chi3/+HeterozygousUnknown2 figures with image from Mikami et al., 2015
mib1ta52b/ta52b; mib2chi3/chi3ComplexFig. 5 with image from Mikami et al., 2015Fig. 3 with image from Mikami et al., 2015
mib1tfi91/tfi91; mib2chi3/chi3ComplexFig. 3 with image from Mikami et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations