Genomic Feature

os50

ID
ZDB-ALT-160310-1
Name
os50
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jontes Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 14
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 40389655 (GRCz11) (1) Details
Nucleotide change
A/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CTCGTCTTAATCTCAAGACCGAAAATATCATTCGGGGTGATGGTGTACGTTTGAATGCCGTTGCTCCCCGAGTCCGGATCGCTTGCCCCCTCTAGGGGAAATCTGGTACCGGGAGCGGCATTTTCCGAGATTTCTATGTCAATGTGGTTGGTGGGGAAGCGGGGCGCGTTGTCGTTTACGTCGATAATCTCAATTTTGATCACGCAGATCTCCATCGAGTTCGACATCACCTCTAACGAAATAAAACACTTAGGTGTCTGTCGGCAAACAGCGTCCCGATCAATTTTTTGCTTGGTGATGAGCAGTCCGGCAGGGCTCAGATTAACCCATCGTGGCTCGGAATTGGAGATAACCCGCAAATAAGGCTGTCGGTTTCCAAGTGCAAAACCCGCAACTTTTGCGTCCGCCGTTACGTTGGCTATCTTTGTGCCTGCACGCAGCTCTTCCTCCACGGTGTATTTCAAATTGAACACGGCATCGACTCCAGTCCAGCACAAGAG
A/- AAGCACACAAACATTTGTACGAAATCCATGTCCTTGGAATGCATTGTACCTGTTGATGTCTGTCTTCACGCGCTCATTTGCATGATCGTTTATTAACATTTAAACCTATGCACATTCGATACGACGTAAAAAAAGCTCCAAAAAGTCAAACGAACAAAATCACAGTCTGGCAGATATCCTTTAAAATGATCGAAAATGTTTATATCTGCGGTGAAATTCATTTGACTTACTGATTACGCAGTGGATAACTTCCATTTACTTTATCGACATCTTATCAGGCCACCCATGTCTTGCACTATTTGTGAAGAAAATGTGAAGAAAACTGGAGAATGTTTCTTCATCTAACGAATGAGACAACATTGTGAATGGAAAACATGGCTTCAACGTGAACATTTGGGTAATTCACGGAAACCGAGATGTATACCGACCATTTTGAGCCAGTGAAAGAAAATATTCAGTACTAATGTGGGCTAAATGTCCACTTGAAGGTCCTCAACTTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
pcdh19os50/os50Homozygous♀+/- ♂+/-2 figures from Cooper et al., 2015Fig. 3 from Cooper et al., 2015
pcdh19os50/os50; os49Tg/os49TgComplexFig. 3 from Cooper et al., 2015Fig. 3 from Cooper et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations