Genomic Feature

js202

ID
ZDB-ALT-150311-5
Name
js202
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Ogura Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 38493743 - 38493749 (GRCz11) (1) Details
Nucleotide change
TCCCCCA/-
Variant Notes
Tatsumi et al (2014): A 7-bp deletion mutation located near the start of region  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTACAAAGTGAGGTTATGATCACTATCTGACAAGACAATGCAGCAAAAACTAGTTCTTAGAATGTCACAAAAATGCAATATTTATACCTCTTCAGGCGAAAATTAGGTGAATAACTGCAAAAAGGTTAAGTTTCAAAAAAACATGATTTTTAAAACATGAAGAGAACATGATTTAACCCTTACTGCCACTGCGCGTCTTGATTAATGTTGACAGCACAATTTTTTTTAAGTGGATTAAATTATTGGTGGGGATATTGGTGGGGTCGTGACCCTAAATCAATGCCCCTGTAAACAAAAGCTTGTTTCGAAGATATAAGCAAACCAGAACCACATATGCTGAACCTCACCTTTTCTGCAGTGTCGCATTGCCATCTTGCACCTCCTAGATTCAGCGATGGTTGGACATGGTATTGTGTCCTTTGGTGGCTTCTTCACAATATGCCTTGTTCTGGTTTCCAGACCCCACTTGAAACCACAGGTTTTGTTTCTTCTGGCGCAGG
TCCCCCA/- TTCACTCCACTGGCCCACTTCACAACCCTCTGTTAGGTGAAGAACCAGAAACAAAATATTATTTCTTATGAAAGACAATGGTTATTCAAGTTTTACACTGATAAGATACACTAAATAACTAGACAAGTAAACTTCGTAGACAAACTTTATGGTGGCTTGAGAAAGCCTCATCTGAAAGTTTGAAGTAGTTTTAAAGTTTAAATAATTAAAGTAGCTTTAATGAAGTTTGAAACAGTTGCTATAGATAGATAACTACATATGACAGCATGTTTCTAGTATGGATTGGCATGATTCTTGTTTGGCGGTTGATATGGTGTTCTAGGTGGTTGCTAAAGTGTTGCTAGGTGGTTGCTAAGGTGCTCTGACTGGTTGCTAGGGGGTTGCTAGAGCATTTCTAGTGAGTTGCTAGGTTGTCCTGAGTGATTGCTACGGTGTTGCTAGGTGGTTCCTAAGGTGTTGCTAGGCAGTTGCTCAGGTGTTCTTGGTCATTACTAAGGTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rspo2js202/js202Homozygous♀+/- ♂+/-Fig. 5 from Tatsumi et al., 2014
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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