Genomic Feature
um197
- ID
- ZDB-ALT-140917-10
- Name
- um197
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Sagerström Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 12: 27141724 - 27141740 (GRCz11) (1) Details
- Nucleotide change
- CAGCCCTTCCACCTCAA/TGTTTCAATCGTGAAACACAAATTCACAAATTCAAT
- Variant Notes
-
Weicksel et al, 2014: Insertion/deletion (+19 bp)in exon1 of hoxb1b
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 36 bp inserted / 17 bp deleted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TAATTCACATTAGACCTACATAGCGACTTTATCAGATTGACGGGTGGATTCGATTGATGTGTTTGTCATGTAAATACGAATCGTTTGATGGACACCTGCAACGCCCAGAGTGCTACCGCAGGTCGCACACTATTGGCGCAAAATTAGTCACATGATCTGTCACTTAACTGATATGAGCTCAGATACAACTTTGCGTGGTTTGACATACTGCTTAGAGGTTGTAGGGGCACTGGGACCACACATCAGCTCATATTGACCCTGCTTAATCAATTTTGCTTGGTCAGTCAACAATGAATTCTTACTTAGATTATACGATTTATAACCGTGGTTCTAACACTTATAGTTCGAAAGTTGGGTGTTTTCCTGTAGAGCAAGAATACTTGCCAAGTGCTTGTGCAAGTACAAATAGTTACATTCCCGAGGGACGGCCAGTCGGAGGAAACACTTTCACATCGGCACCGCACGAAACTCATGGCACATCTTACGCACAAATTCAATCG
CAGCCCTTCCACCTCAA/TGTTTCAATCGTGAAACACAAATTCACAAATTCAAT CGTGGACATGGGTAAAACAGGACACAGCAATTTCTGCAAGCAAACCAGACCTCCTCATTCGGACTATGGACATCAACACGTTCTCACTCAAGCAGATGACCACATGCGCCTTCAGTCCCCTGGCTTTTCCGTCGTGAATATGGGAGCCAATATTGGAACTTACAGTGAATCAAACTGCAGGCCTGGCTCGGTCTCTGCAAGCCACTATCAATCATATGCATATGGAGAACCCGAACCACACGGCTATGGTTCGTTCAGCAAGTATCAGGTCTCCCCTGACAGTGACAGCGACTCCAAGACGAACATTAAACAAGCGCCAACCTTTGACTGGATGAAAGTCAAGAGGAATCCCCCTAAAACAGGTGAGTTATGACTAGTTACAATGGCTATAGATAATGTGATATTAAAATACAGTTTCTAAGTCGTGTTTTTATTCAATGCTAATTTTCAGTTAAAGTCGCCGAATACGGAATCCATGGCCAGCAGAACATAATACGCAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None