Genomic Feature

i276

ID
ZDB-ALT-140717-4
Name
i276
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Ingham Singapore Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 9
Variants
Variant Type
Insertion
Variant Location
Chr 9: 37272481 - 37272482 (GRCz11) (1) Details
Nucleotide change
-/CTGT
Variant Notes
Wang 2013: 4-bp insertion in gli2a which causes a frame shift resulting in a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp inserted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GACGGGATTGTGAATGCTGAAAAGTGCAGATAGGTTTTAATTCGTTATGTAATTCTTACTAGAAAGAACCTAATTTGTAATTGTTTTATTTTTCAGCATGATAATCCCTAACACACTGTTAATGTAATGAAATAATATGTGGAGAGAAAAACATCATGAAATGGCCTCCACAGTGTCCAGACCTAAATATTATATACAATATGTATATGCAATATCACAGGCAGTATGCCATTCTCCTGGAGAGAAAACATAAAGTTAGATTATGCTAAATCTAAGGAAGAACTTTTAGAAATTTTATACAATATGCATACAATATTGTTTATACACAAAGAAACCTAAATATTAGCATTGGCTATCAGCCATATTGGGTTATTGCGAAAAAAAAAAAGTATTCAGGTTCCCTATAACTTAAACAAGCTAACGCCTTTTCTCTTTTTTACCATTCCAGTCCATCCTTCACGTTCCCACACCCCATCACACCGGTTGCATACCACCAGCTGT
-/CTGT TGTCCCAGCAGAGGGGTCTGAATGCATTTGGACACACTCCTCCTCTGCTGCAGCCTTCACCTGCCCTCAGCAGCAGACAGCAGACACTCGTGGCTGCAGCCGCTCTCAACAACACCACCAGCAGCAGCACCAGCAGCAGCACTGCAGACACCAGCACCGAGTCCAGCCAGGTGATTATTACAGCATTACTGATGTGGCGTTTAAAGTAAAATCTTTCATTCACTGAGAATGTACAGTGCTTGGCATAAATGTGTACACCCCTCACAAAGCTCTGTACACTATAACATGTTTGGGTATATACATTAGATTAGTCAGTACCAAATCAAAAACTAGATCTAATTTAATGAAATAACTGTAAAAAGTACACCCAAATTAATATGAAAAAATATTAAATACATTTTTTTTTACTTTGTTTTTAATGATTTTTTTTAGAAACATATGACCAGTGGGAACAAAAAAAAAATAATAATAATAAATAATAATACATAGATATATAGGCAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gli2ai276/i276Homozygous♀+/- ♂+/-3 figures with image from Wang et al., 2013
gli2aty119/+; gli2ai276/+Complex2 figures with image from Wang et al., 2013
gli1ts269/+; gli2aty119/+; gli2ai276/+ComplexFig. 4 with image from Wang et al., 2013Fig. 4 with image from Wang et al., 2013
gli1ts269/ts269; gli2ai276/i276ComplexFig. 3 with image from Wang et al., 20133 figures with image from Wang et al., 2013
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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