Genomic Feature

au1

ID
ZDB-ALT-140130-9
Name
au1
Synonyms
  • uta1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Gross Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Point Mutation
Variant Location
Chr 2: 33983412 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
G->A at the intron 4 splice-acceptor site resulting in the removal of  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
G>A in Acceptor Splice Site of Intron 4 (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Deletion: 19 AA missing (1)
Sequences
Flanking Sequence
CTTCTCTATGTCCCCTTTCCATAAGGGCTTCTTCAGGCTGGGGGATTGGGTGGTGGAACAGGGGTGCAGGATTAGAAATTGTCCTGTAAAGTCTCCTCACTACACCGATGACAGCTCAAACCCCAGTGATGACGGAACCAGGCTTTAGCTTACCAAAAGACTAAATTGAGCTTTTGCTTGGGCCTTGATGTAAGAGTTTGTTGAAGACAGCACCATTTTGGTTGAAGGTAAAGCCCAATTGTTATAGAAGTGTGCGTTATATTAAGGAGGGGGGGTCAAGTGTTTTAAAGCCAAAGTTAAAACACAGAACCTTGTGCTGTAGTTAATTTTTTGTCCCTAAAGCTTAGACTGGTAACTTCATTGGAAAAATGTGGCAATATATTAATTAAGAATAATCAGAATGCTTACGGTAAGTAGGCGGAGCCTCCCTGCAACTTGGAGCCTTCCCAAAAGCAGTCCAAAGGAGTCACAATCATGCAGGGGAAAAGCTTATCAATCAT
C/T TGTGAAGAAATTGTGTATCATCTTTAAAGAAAGTTTTATGGTACAGAACAAAAAAAAAAGTTATAAAAACTACAACAGCTTGGACTAAGCAAACAGTAAATAATTCTTACCCTTTCAATCATGACATTTTCTATAATTGGAACTCCAGATTTGAAGCAGATTTTATTAAGATCCCAAGATCTGTGGGTAGAAATTGTACAAGCAAATGATAAAATGTTTTTGCATTTGTAAGCTTTTGAAATTCCCTGTTGCTGGTGGTTGTACTCACTTTCCATAAAGAGACACTTGAACTTTGCTAGCTGACAGAGCTGCCTCCAGGTGGAGCAGCAAAGCCTCCTGGGTAAGAATATTAGTTCCTTCCTGTTTGGGTGTCTGTATCAGCATCTGTGAGGTGAACACTGACTCCTCTCCTTGCTTCTCTTTTGTGTAGCGTAGCTCCTTGCTCACTCGACTGCCAGCTGAGACAGAGAGAAAACAAGGCATTTTTCAACATTGACGAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ptch2au1/au1Homozygous♀+/- ♂+/-4 figures from Lee et al., 20122 figures from Lee et al., 2012
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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