Genomic Feature

sa13080

ID
ZDB-ALT-130411-2744
Name
sa13080
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Point Mutation
Variant Location
Chr 11: 6046947 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
A>T (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AGTGGCTTCCTTCACAGAGAGCTCGGTATCTACTAGATCTTTGGCGTTTCTTAGTCTGGTTTGCTCTTTGAGAAGCTGTTCCAGTTGTTTGTCACACGTCGTCTGGGCGTCCTGCAGTTTTTTGCTGCTGTCCGACGCCTCTTTTTCCGCTTCTGTTTTGCACTTGTCCAGTTCTGAAGTCAGCTTCTCATTCTGTATCTCCAACCAGCTGCTCTGTTTCTGAATATTGGAGACTTTGGCACCCACGTTGTTCAGGTAGCTCTGGAACTTGTCCTCCACCTGCCGAGAGAGGCTGGAGCAGTTGGAGCGAATCCTGTCCATCTGCTCCTCCTGCTTGGGGCAGGTGAGGTGAAACGTGACCGAGTTGGTGAAGAAGTTGTCAATTTTGCTCAGGAAGGCAGTTGTGACCGTCTGGATGCCTTGCAGGGAGTCGGCAAAGTCTTCTTTGCACTTTTTGGTGTAAACATCAAGCTGAGATTTCAAATCTTTGTTTTCCTGTC
T/A CAGTTTTATCACCTGGCTGTGGTGCTCGTTTTTATCCTTCACTGCGTGGTCCAAATCAGATTTAAGGTACTCCACGGTCTGGCTGAAGTTACTCTTCAGGATCCCATACAATGCCTTCTGCTGGTCCAGTAGAGTATTCAGAGTTTTTACTTCACCTGAGACGAAAAAAGAGGGAGATGCCTACAGGATGGTTTATTCGTGACATTAATTATTCATTGATTGGTTTATAGACTCACCACTCTGATTGGGGTTAGCTGGTGGACACATGAGGGGAGTATTTCGAGTGCTTGAAAGCTTCAATTTAGCATTGGCCTCGCATTGACTCTGTAAAACAGACAATCGAAATCAAACCTTTCATTATTGTTGGGGTTACAATTTTAATATACCTTAAAACACAGGTGTCAAACTCAGTTCCAAAAGGGCCGCAGCTCTGCACAGTTTAGTTCCAACCCTAATTAAACACACCTGATCAAACTAATCGAGTCCTTTAGGCTTGTTTG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
plvapbsa13080/sa13080Homozygous♀+/- ♂+/-2 figures with image from Gordon et al., 2019
plvapbsa13080/sa13080; lri500Tg; y171TgComplexFig. 7 with image from Gordon et al., 2019Fig. 7 with image from Gordon et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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