Genomic Feature

sa1621

ID
ZDB-ALT-120411-225
Name
sa1621
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Point Mutation
Variant Location
Chr 16: 14220439 (GRCz11) (1) Details
Nucleotide change
G/A
Variant Notes
sa1621 has a single G>A substitution in the splice donor site of exon 4 of gba,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
G>A in Donor Splice Site of Exon 4 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GTGAGAATAATACATTTGTCGACCAGTTGTGAGTTTTCTGTGTACATATTATACATTTGTTAAATAAATCTAATTATACATAATTTTCCAGCCAAATGCTAAACGCTTTTTCTCTCCTTTTCTGAACGCCAGCTCTCAGAATCACTCTGAACCCCAGTCAGAAGTTCCAGCACATTAAGGGATTCGGGGGAGCCATGACGGATGCAGCAGCCATTAATATTTTGTCTCTGTCTTCCGGAGCTCAGGACCAGCTGCTCAGACAGTACTTCTCCACAGATGGTGAGAGCAACAGAGATTGAGCAAGTGGAAATGAAAATGGCCTCGGCTTTCTCAGTTCCGAATGGTGTACATCGCTCTGTTTCACAGGTATAGAGTACCGTTTCGTGAGAGTGCCGGTGGCCAGCTGTGATTTTTCAACTCGACTCTACACGTATGCTGACACTCCAGAAGACTACGATCTCCAGAACTTCACCCTGGCCAAAGAGGATGTTCACATGAAG
G/A TAGCATACACAAACAAAAACACACCTTACTACAAATAGCGGTCTGCAGTAGTACTCGCTTGAGGGTAAATATTGCGTAAATAGTGATTTGATTTTCATTTTTGAGGGAACTTTCCCTTTAAGTGTTCATGTCAATGCATTAAAAATACAATTTACTCAACATTTTGCTACCTTTCGGGTCAGAATGTATTTTAAAGTAGTTATTGATTTTTACATGTTTTAAATTAATATAATATTTAAATTATCTATATGTGTTATTTACAAAAAAACATACTAGAAAATTACTAGAAAAAAACTTTGTTTTAAAATGGCAAATGTTCGTTTTTATCATTTCATTTTCATTTTGCGTCAAACTTCGCACATCATGCGAAGAATGCAAATTTAAATACAGCAATACAATGCAAAAGTACATTTTGCTTATCGTATTTATTATTCAAAAGAAGGTAATGATTCGCACTCAATTGCTTCATACTGTTTTTATTTGTACTTTTTCTTACATTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gba1sa1621/sa1621Homozygous♀+/- ♂+/-Fig. 1 from Zancan et al., 2015Fig. 1 from Zancan et al., 2015
gba1sa1621/sa1621 (AB)Homozygous♀+/- ♂+/-Fig. 5 from Costa et al., 2020
gba1sa1621/sa1621 (TL)Homozygous♀+/- ♂+/-text only from Busch-Nentwich et al., 2012
gba1sa1621/sa1621; gz15TgComplexFig. 2 from Zancan et al., 2015Fig. 2 from Zancan et al., 2015
gba1sa1621/sa1621; ia4TgComplexFig. 4 from Zancan et al., 2015Fig. 4 from Zancan et al., 2015
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Supplemental Information
Genotyping protocol
None
Citations