Genomic Feature
sa1343
- ID
- ZDB-ALT-120411-112
- Name
- sa1343
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation
- Protocol
- adult males treated with ENU
- Lab of Origin
- Stemple Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 11: 7114515 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>A (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
TATTTTGATGGTCCATTTGAGTATTGGTAGACTGCTTAATATCTGCTGATACTGCTCCTTCAACAGACATTTAACTGACTATAAGAAACTTTGCAAGTACAAGTCAACGTACACTAACCCTAACCTCAACCTAACAGTCTACTTATAATCTAATGAGAATTAGTTGACATGTAGATGCAAATGTAACTAAAATTCAACAACTGGACCATCAAAATTAAGTGTGACCTCACATATACCCTCAACCCCCCACAAAAAATGTATAAATGAAACTAGAGTAAGGTAATTTTAACTTTCTCAAAGCCGTTGAAGCACAATTCTGCCAAATGATGATTTAGAGTGGTAGTTTGACAGGATGAGTTATAAAGGTATCTTGATATCTGAAGTTGCTCACCATGTGAGGTCTCCACTAAGAGCTGCAGTCCTAAGTTCTGACCTGGGTTTATAACCCAGTGGTTACTGGTGACCGTGAGGTCAAAGACCAGCCATCCCTCTTCTGCAGC
C/T CATACCACTCGTGAGTCCAGCAGGTACAGCTCCCTGTGCAGGGTCAGAAGAGGTCATACAGTATATAGGTTAGTAAGTGGATATGATGAAATAATAGAAAATGCATAAATAATCAGTGTCCTTCATCCATGTTAGACATGTACAGTTGAAATCTGAATAATTAGCCCCCGTTTATTTTTTACCCAATTTCTGTTTAAAAAAAATTTGAACACATTTCTAGACATAATAGTTTTAATAACATCTTTAATAACTGGATTATATTATTTTTGCCATGATGGTAGTAAATAATATTTGACTCGATATATTTCAAGACACTTCTATACAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTGAAATAGGTTAACTAGGCAGGTTATGGTAATTAGACAAGTTGTTGTACAATGATGGTTTGATCTGTAGACTATCAAAACAAAAAATAGCTTAAAGTGGCTAAACATTTTGACCTTAAAAGGTCAAGGACGTACTGTGAAAATCT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| bmp7asa1343/sa1343 (TL) | Homozygous | ♀+/- ♂+/- | Fig. 1  from Busch-Nentwich et al., 2012 |
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Supplemental Information
- Genotyping protocol
- None
- White, R.J., Mackay, E., Wilson, S.W., Busch-Nentwich, E.M. (2022) Allele-specific gene expression can underlie altered transcript abundance in zebrafish mutants. eLIFE. 11:
- Kok, F.O., Shin, M., Ni, C., Gupta, A., Grosse, A.S., van Impel, A., Kirchmaier, B.C., Peterson-Maduro, J., Kourkoulis, G., Male, I., DeSantis, D.F., Sheppard-Tindell, S., Ebarasi, L., Betsholtz, C., Schulte-Merker, S., Wolfe, S.A., Lawson, N.D. (2015) Reverse Genetic Screening Reveals Poor Correlation between Morpholino-Induced and Mutant Phenotypes in Zebrafish. Developmental Cell. 32(1):97-108
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