Genomic Feature
hu3173
- ID
- ZDB-ALT-090424-1
- Name
- hu3173
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- embryos treated with ENU
- Lab of Origin
- Ketting Lab
- Current Source
-
Zebrafish International Resource Center (ZIRC)
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European Zebrafish Resource Center (EZRC) ( order this ) - Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 5: 16472288 (GRCz11) (1) Details
- Nucleotide change
- C/A
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>T (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
GAGACGAATTGTTTGTGATTGGATGTTTTTTGGCCCGATTGAATAATTTCACATGAATATTGAAAAATTAAGACCCGTTTAAAATGATTTAAAACCCACAACATCATATTTGAGTGAATTTAAAACTATTTAAGGCCTAAAATTTTGTTTTTGAAATTTAAGACATTTTAAGAGTTCTTAAGACCCCGCAAACACTTCTCTGCTTACCTTGGCAACAGTTGGAGCCACCTCCGCTTGCAGCTCAGGCATCTTTTCCTCCACCTCTGCTTTTTGAATGTCCAGTGTAGGCACTGGTCCAATAGCAGCCCCTCTCCCTATCCCAACAGTGGGCTCAGGAGTGGGCAGCAAAAAACCTCGTCCTCGCCCAAAACCTCCCTCTTCCATAGGTAACCTCACACCTCTAGCCATGCCCACCAGAGGCTCAGCAGCTATAGACTGAGTTATCCCTCTACCAAATCTCACCGGCATTTCTCCGGGTACACTAAAAGCTCTACCTCGTC
C/A AGGAAGAGGTTCATCTATGGGCATGATAAGACCTCTGGCCCGTCCCAATGAGGGCTGATCTAAAAGTTGACTCTGATCCTCTGTCGACTGCTGCCATGGTGCCCGGATGACCCCTGGGGGACTGGGAAAGGTTGGTCGTTTTGGATCCATTTCTTCCTCTGTTGCACTTCACTGCAACTGACAAAAAGAGCATAAATCAATAAGTGTTTCTTGGCATATCCATTATCAAACCAATGCAGACCTCCAGCATTATTCATCTTTGTACATCCCAATGCACTTAACGTTTAGTTCACCCAAAATGAAATTGTACTCACTAAATACTCACTCTCAAGTGCTTCCAAACCTTTATGAGCTTTTTTCTTCTGTTGAACACAAAAGAATATATTTAAAAAAAAGCTGAAAACCTGCATCCTCGCATTCGTGTGGGTTTCCTTGGGGTGCTCCAGTTTCTCCCACATTCTAAAGACATGCGCTATAGGTGAATTGAATAAACTAAATAG - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
piwil2hu3173/hu3173 | Homozygous | ♀+/- ♂+/- | Fig. 3 from Houwing et al., 2008 | ||
piwil2hu3173/+ (AB) | Heterozygous | Unknown |
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Supplemental Information
- Genotyping protocol
- None
- Redl, S., de Jesus Domingues, A.M., Caspani, E., Möckel, S., Salvenmoser, W., Mendez-Lago, M., Ketting, R.F. (2020) Extensive nuclear gyration and pervasive non-genic transcription during primordial germ cell development in zebrafish. Development (Cambridge, England). 148(2):
- Houwing, S., Berezikov, E., and Ketting, R.F. (2008) Zili is required for germ cell differentiation and meiosis in zebrafish. The EMBO journal. 27(20):2702-2711
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