Genomic Feature

j4blue

ID
ZDB-ALT-001205-16
Name
j4blue
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Stephen L. Johnson Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 3153746 - 3153750 (GRCz11) (1) Details
Nucleotide change
CACAG/-
Variant Notes
A 5 nucleotide deletion near the middle of the 2nd kinase domain leads to 32  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted from position 2648 to 2652 in GenBank:AF240639 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTTTTTAAATTGCATTGAACAACACCCCCCGCCATTTATTTTTATGACCAGTGTTGCTAAAAAAATTTAATAATTACTTTCATATAAAAATTAACATAAAATTACCTCTGATAAAAGCATTTGTCAAATGCTTAACAATTCAACTTGCATCCAATGGTATTATTAATACAATTTTTTACGCATAACAACTTGTACAATCTCATTCAAATGAAGGTGTGTGTTTTTAAGAAAGCCCCTCTCGCAAAAATAACCATCATTGATGCAAGAGCAGAATATACAAAGAGGAACAAATAACATAATACAAAATTCCACTATGCGCCACTAATTCAAGAAAATACAGCACAGGAATTGTCATGTGACTGCGTTGGCCCATTCAGCAGCATCTTTACATGCATGGAAATGAGAAGCAGACAAACCTTTCTGACAACTCAAAAAACTAAATCAGAGCTTCTTTAACCTTTGCTGTTGTGTTCCTGACTCACCCAGTGAGAAAATCTCC
CACAG/- CATGATCCCGTAAGACCAGACGTCACTCTGAACCGTATAAACACACTCGAAAATGCTCTCTGGAGCCATCCACTTCACTGGGAGACGAGCCTGAAAACACACACACACACACACACACACATACATATGACACTGAACCACAAAACCAGTATGATGCTGCATGCATGTCATGATTTTGCCAAGTATGATGCAATCCTGGATTAACATCTATGTTGATCCTGGAACATCGAAATTTTGAAAATGTAATCCATAACTATTCCTTACAACAAAACTGTAAAATATTCTCAAAATCAGAGGTGGATAACAGTTGGACAACAATCATGTAGAAGTGCGTAAATCGGACTATCTGATCAAAGGGAAGGTTGCAATGGCAGCGCCCTCTCTTACGTAAAGACTAAGGTTAATATGAATATTAATGTGGTGTTAGTTTCCTCACGTTTCCTTTGACTACGTAGTTGGAGTCGTTCATGATGTCTCGAGCCAGTCCGAAGTCACAGATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations