Transcript

si:ch211-190h11.1-009

ID

ZDB-TSCRIPT-160112-456

Name

si:ch211-190h11.1-009 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch211-190h11.1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139344 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000139344.4|gene_biotype:processed_transcript|ENSDARG00000092254.4 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:11:17138535:17141653:1
CATTGTATGTGGCGATCTATTTTTTACAGTCTATGCTCGC
TATCCCAAGGTTCATTGCGATCCCAAGGTTCACTGCGGTT
TTCCACAAGCCTGTTTCTGCCTATCACCATGAGTGATTCC
TTGATACTCATATTTATCATCAAGATCTCAATTATAAGCT
CAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCA
CCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAG
GCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCT
TGCTCCAGTGACTGTGAAATGGAGTGAGGCATACAAGGAT
ATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCA
ATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACT
GTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCA
ACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGAC
CACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCAT
GAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGT
CTGTGACGTAGAGGAGTGGGCAGACGGTGAGGAAATTCTT
ATTAATATTACATGTAGTCATGAAAAATTGTAAGTGTTAC
TATTATTGTCATTTTTTTCAGTAGCAGAAGCAAAGACGAC
AAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCAT
GACTCTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACA
TCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCT
TGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACT
CATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTA
CTGAAAAGTATATTCGACATGTGGCCTAAACGAAGAGGGG
TTAAAAGGTCTATGGATCATCATTCTCAGAAAGCAACAA

OTTDART00000062687 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000062687|OTTDARG00000043270| CH211-190H11.1|no_translation CH211-190H11.1-009 LG_ CR769769.7 Danio rerio processed_transcript NOVEL, 959 bp
CATTGTATGTGGCGATCTATTTTTTACAGTCTATGCTCGC
TATCCCAAGGTTCATTGCGATCCCAAGGTTCACTGCGGTT
TTCCACAAGCCTGTTTCTGCCTATCACCATGAGTGATTCC
TTGATACTCATATTTATCATCAAGATCTCAATTATAAGCT
CAAGTCTTGATGACAACTTGATGATCTGCAGGAAGCACCA
CCATGTATAGAGGGCAAAGACCACTCTGGAATCAGTCAAG
GCTCATAGGAACTCCAATCTTCCCAACTGTGAGAGGGCCT
TGCTCCAGTGACTGTGAAATGGAGTGAGGCATACAAGGAT
ATGTGTGGTTTTACTCTTGGGAAGGAGGTTGAACAGTGCA
ATATTTCTTCTATAGGATTGCAGTGACCAGACATGCTACT
GTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCA
ACAATTTGGCCATCTTGCTGACCTATTGATATCAGAAGAC
CACAACAGCTCTGCAAAGCAAGTTGGAAAACAGAATCCAT
GAAACTGGCAGTGACCGGAAACCAGTTAGAAGACTTTGGT
CTGTGACGTAGAGGAGTGGGCAGACGGTGAGGAAATTCTT
ATTAATATTACATGTAGTCATGAAAAATTGTAAGTGTTAC
TATTATTGTCATTTTTTTCAGTAGCAGAAGCAAAGACGAC
AAACAACAGAAGTGATATGGATGTCTTCGTCATATGGCAT
GACTCTGCTGACCCAGCAACAAAGAGGAGGGTGTTCAACA
TCATCCTGCTAGTCAGGATTCTTCAGAAGCAGTGGATTCT
TGTGGCAGAGATGGCCAACCACTATAAATACATTTCAACT
CATCCTGGTTCCTTCAAAGAACTTTCCTGCTTGTTTGCTA
CTGAAAAGTATATTCGACATGTGGCCTAAACGAAGAGGGG
TTAAAAGGTCTATGGATCATCATTCTCAGAAAGCAACAA

Related Transcripts

Transcripts related to si:ch211-190h11.1

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-190h11.1-001 (1) Ensembl	Ensembl	1,425 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-002 (1) Ensembl	Ensembl	700 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-006 (1) Ensembl	Ensembl	1,071 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-010 (1) Ensembl	Ensembl	300 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-003 (1) Ensembl	Ensembl	1,197 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-004 (1) Ensembl	Ensembl	906 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-005 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-007 (1) Ensembl	Ensembl	1,425 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-008 (1) Ensembl	Ensembl	789 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-009	Ensembl	959 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations