Transcript

si:ch211-190h11.1-004

ID

ZDB-TSCRIPT-160112-139

Name

si:ch211-190h11.1-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch211-190h11.1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173203 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173203.2|gene_biotype:processed_transcript|ENSDARG00000092254.4 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:11:17138571:17140191:1
TCGCTATCCCAAGGTTCATTGCGATCCCAAGGTTCACTGC
GGTTTTCCACAAGCCTGTTTCTGCCTATCACCATGAGTGA
TTCCTTGATACTCATATTTATCATCAAGATCTCAATTATA
AGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGC
ACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGT
CAAGGGTTAGTGAAGTTTTTCATTCCATGTATATTAAATA
TCTACATTGTTTAGGCATATATGATTGTATGAGATAAAAT
GCATTTATTCTTTCACTTCTATTGTAATAACAGAGAGGAA
CGCATTAGTTTTACTATTACTATTGTTTATGAAAAACATT
ATAAACTACAGTATAAGCTCACAAAATATTGTGGCCTAAC
TGTTTAAAACTATTTGTTCTGGGTGTTGATAGTGGCCAAC
CATTTTTTTTCTTTTTCAGAAAGTATTTTGTTTTGTCGGA
TTTTATGACACCTTAAAGGCCATCAACTGTCCACATTGCG
GTTTAGGAAATTAAACAACTAATGCTGCTTGTCTACTAGT
CTTAGGATAAGTTAGAATTGTTATAAATGTTAATTTTTTG
TTGTTTTTATCTGGTACAGCTCATAGGAACTCCAATCTTC
CCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGTG
TACTTTAATGTTTCCATTAGTCCCTGTATCTGTAGATCTA
GGTGACAGTGGGCTAGAGTAAAAATTTGTTTTTATTTAAA
CTAAGGCATACTGATGGCCTTTTTTATCTCAGATTTGGTC
ATGCAAGTATTAATATATCCTAAAATATTTTTATATTCTT
TCCATTGGTGGAAAAGAGTTTGGTATAATTATTTTTAATA
GACTGCCAAGATCTCAGCAGACATTT

OTTDART00000062689 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062689|OTTDARG00000043270| CH211-190H11.1|no_translation CH211-190H11.1-004 LG_ CR769769.7 Danio rerio processed_transcript NOVEL, 906 bp
TCGCTATCCCAAGGTTCATTGCGATCCCAAGGTTCACTGC
GGTTTTCCACAAGCCTGTTTCTGCCTATCACCATGAGTGA
TTCCTTGATACTCATATTTATCATCAAGATCTCAATTATA
AGCTCAAGTCTTGATGACAACTTGATGATCTGCAGGAAGC
ACCACCATGTATAGAGGGCAAAGACCACTCTGGAATCAGT
CAAGGGTTAGTGAAGTTTTTCATTCCATGTATATTAAATA
TCTACATTGTTTAGGCATATATGATTGTATGAGATAAAAT
GCATTTATTCTTTCACTTCTATTGTAATAACAGAGAGGAA
CGCATTAGTTTTACTATTACTATTGTTTATGAAAAACATT
ATAAACTACAGTATAAGCTCACAAAATATTGTGGCCTAAC
TGTTTAAAACTATTTGTTCTGGGTGTTGATAGTGGCCAAC
CATTTTTTTTCTTTTTCAGAAAGTATTTTGTTTTGTCGGA
TTTTATGACACCTTAAAGGCCATCAACTGTCCACATTGCG
GTTTAGGAAATTAAACAACTAATGCTGCTTGTCTACTAGT
CTTAGGATAAGTTAGAATTGTTATAAATGTTAATTTTTTG
TTGTTTTTATCTGGTACAGCTCATAGGAACTCCAATCTTC
CCAACTGTGAGAGGGCCTTGCTCCAGTGACTGTTGGTGTG
TACTTTAATGTTTCCATTAGTCCCTGTATCTGTAGATCTA
GGTGACAGTGGGCTAGAGTAAAAATTTGTTTTTATTTAAA
CTAAGGCATACTGATGGCCTTTTTTATCTCAGATTTGGTC
ATGCAAGTATTAATATATCCTAAAATATTTTTATATTCTT
TCCATTGGTGGAAAAGAGTTTGGTATAATTATTTTTAATA
GACTGCCAAGATCTCAGCAGACATTT

Related Transcripts

Transcripts related to si:ch211-190h11.1

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-190h11.1-001 (1) Ensembl	Ensembl	1,425 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-002 (1) Ensembl	Ensembl	700 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-006 (1) Ensembl	Ensembl	1,071 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-190h11.1-010 (1) Ensembl	Ensembl	300 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-003 (1) Ensembl	Ensembl	1,197 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-004	Ensembl	906 nt
ncRNA	si:ch211-190h11.1-005 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-007 (1) Ensembl	Ensembl	1,425 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-008 (1) Ensembl	Ensembl	789 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-190h11.1-009 (1) Ensembl	Ensembl	959 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations