Transcript

slc1a1-202

ID

ZDB-TSCRIPT-141209-2415

Name

slc1a1-202 Nomenclature History

Previous Names

slc1a1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

slc1a1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000169355 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000169355.2|gene_biotype:protein_coding|ENSDARG00000020212.10 transcript_biotype:nonsense_mediated_decay gene_symbol:slc1a1 cdna chromosome:GRCz11:7:69506451:69521276:-1
AAGCTCCGAGCCTCGCCATATTCTCTCGCCTGCTCACAGA
TTAAACTCCATCATGGAGATGCTGGGGAAGAAAGAGCGGA
GAAGCAGAGATGTGAAGGGTTTGCTGAAGAGGAACTGGAT
TCTCATTGCAACCATCATTGCGGTCATTCTGGGATTGGTC
TGCGTGCAGTGGTTTATTACATCTCCACCACCATTATTGC
CGTCATTCTTGGAATCGTTCTTGTGATGACTATTAAACCT
GGGGTCTCTCAGAGTGCTGATAATATCGACCGAGAAGGAA
CTACTCCAAATGTGACCACCGTTGAGACCTTACTGGACCT
TATTAGGAATATGTTTCCTGAGAATCTTGTGCAAGCCTGT
TTTCAGCAGTATAAGACACAGCGCAGAGAGATCGAACCAA
CAAAACCCAGCATAAACACAACTAATGCAACTGCATTCCC
ACCGTTCACCACCATCATCTCAACAGTTGCACAGAATTTG
ACCAAAGACTACAAGATTGTGGGCTCATATTCGGATGGCA
TTAATGTCCTGGGTCTCATCGTATTTTGTGTGACTTTCGG
CCTGGTCATCGGCAAGATGGGAGAAAGGGGACGAATCCTG
CTCGAGTTCTTCGATGCTCTGAACGAGGCCACAATGCGAA
TCGTTCAGATTATCATGTGTTACATGCCCATCGGCATCTT
CTTCCTAATTGCTGCCAAGATCATCGAGGTGGACGACTGG
GAAATCTTCAGGAAGCTGGGCCTGTACATGGTGACGGTGC
TGAGCGGGTGAAGCAGCTT

OTTDART00000062177 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062177|OTTDARG00000035369|ZDB-GENE-040718-414 slc1a1|OTTDARP00000048595 slc1a1-002 LG_ CU672220.8 Danio rerio protein_coding KNOWN, 779 bp
AAGCTCCGAGCCTCGCCATATTCTCTCGCCTGCTCACAGA
TTAAACTCCATCATGGAGATGCTGGGGAAGAAAGAGCGGA
GAAGCAGAGATGTGAAGGGTTTGCTGAAGAGGAACTGGAT
TCTCATTGCAACCATCATTGCGGTCATTCTGGGATTGGTC
TGCGTGCAGTGGTTTATTACATCTCCACCACCATTATTGC
CGTCATTCTTGGAATCGTTCTTGTGATGACTATTAAACCT
GGGGTCTCTCAGAGTGCTGATAATATCGACCGAGAAGGAA
CTACTCCAAATGTGACCACCGTTGAGACCTTACTGGACCT
TATTAGGAATATGTTTCCTGAGAATCTTGTGCAAGCCTGT
TTTCAGCAGTATAAGACACAGCGCAGAGAGATCGAACCAA
CAAAACCCAGCATAAACACAACTAATGCAACTGCATTCCC
ACCGTTCACCACCATCATCTCAACAGTTGCACAGAATTTG
ACCAAAGACTACAAGATTGTGGGCTCATATTCGGATGGCA
TTAATGTCCTGGGTCTCATCGTATTTTGTGTGACTTTCGG
CCTGGTCATCGGCAAGATGGGAGAAAGGGGACGAATCCTG
CTCGAGTTCTTCGATGCTCTGAACGAGGCCACAATGCGAA
TCGTTCAGATTATCATGTGTTACATGCCCATCGGCATCTT
CTTCCTAATTGCTGCCAAGATCATCGAGGTGGACGACTGG
GAAATCTTCAGGAAGCTGGGCCTGTACATGGTGACGGTGC
TGAGCGGGTGAAGCAGCTT

Related Transcripts

Transcripts related to slc1a1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	slc1a1-202	Ensembl		779 nt
mRNA	slc1a1-201 (1) Ensembl	Ensembl		2,966 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations