ZFIN Transcript: ca16b-201

Sequence
OTTDART00000054996 (1) [ Show ] (double-click sequence to select)
>tpe|OTTDART00000054996|OTTDARG00000038386|ZDB-GENE-080818-1 ca16b|OTTDARP00000043138 ca16b-001 LG_none BX663614.24,CT485610.7,CU019675.6,BX005101.8 Danio rerio protein_coding KNOWN, 5305 bp
TGTGCTTCAGTTGTCCAGTAGCCAATCCTCGGCTGTCTTC
AGCGGGCGCTCAGAAGCTCAGCCTTCGGCGCTAGGATCCA
GAGGGCAGGGCTTTGATTTCTCAACTAATTCCTCTGGCAA
AACACGAAAGGCTCATATGCACAACTTCCTGGATAGAGAA
GCGGATTCAAGCGACTGACTTTGTAGATGCGCGCGCTCGA
GATAGAGAGAGAGAGAGCCGCTGTACAGAACAGACGAGGA
CGAGCATCTGAAAGTGCGTCCGGCTGGGATTAATAACTAC
TTGATAATGTAAAGAGAATGTAAAAAAGGACGCCACAGAC
AAGAGAAGTGTGCGCGGATTGTGGGCTGTCCGAAATGTCC
CACCAAACAGGCGCAAGATTCGTCGCCGGTCATTAAACAT
CGCCTCGACCACTTGTCATTATTTTGGTTCGTCAAGTTTG
TGGTGTTTTTTCTTCACTGACGCTCAATTTTGATCCGCCA
TTCTGGCTCTAATTGCGCATTTAGACATGTGGAGATTGCG
AGGACCGTGTCGTTTAGGGATGTTGTGTTTGACTTTATCA
GCCCTTCTCATCCAACCCATCAGCTGTCATCCCGCTTCAC
ATGTGGAAACCGTGCGCCGAGGGAGCTCAGCCAATCAGAG
AGAGCGGAGGGCGTCCGGGGAACCCTATTGGGCGTATTCA
GGCACCTACGGACCTCGGAGATGGGCCTCGGCTTATCCAG
AATGTGGGGAGAGGAATCAGTCTCCAGTGGACATCCTAGA
TCCAGAAACCCAAGTCTCTCAGGAGTGCCAGGAGCTCACG
TTGGATGGCTTCGAAACCAAGTCCTCCAACAGGACCACTA
TGAAGAACACAGGCAAAACAGTTTCTATTGTTCTGAAGAA
TGATTACTTTGTGAGAGGGGCAGGCCTTCCCGGACGCTTC
AAGGCAGAAAAGGTGGAGTTTCACTGGGGCAGCACCAATG
GTTCGGCTGGTTCTGAGCACAGCATCAATGGAAAGAAGTT
TCCGGTAGAAATGCAGATTTATTTCTACAATTCAGATGAC
TTTGACAGTCTGAGCACCGCCATAAAGGAGAGACGAATCA
TCGCTGCCATGGCTGTCTTCTTTCAGGTGGCGACGAAAGA
CAATATCGCAGCTGAGCCAATCATCGCTGGTCTCAAACGG
GTTGTCCATCACGAAAAGGAAACAAACCTGGGTTCATTCA
TACTGAGGGATCTCTTGCCATCATCTTTGGGCAGTTATTA
CCGCTACACTGGCTCGCTCACAACACCTCCGTGCAGTAAA
GTGGTGGAGTGGATCATCTTCAGTCGACCTGTTTACCTGT
CCTACCACCAGCTCGAGGCGTTTTATTCCATCTTCACCAC
AGAGCAGCAGGATCATGTGAAGTCTGTGGATTACCTGAGG
AATAACCATCGGCCCATTCAAGATCTCGACAGCCGGCGAA
TCTTCAAATCGGCTCTAATGGATGCCTGGATGCCTGAGAC
CATGGCCAGCGCCGCAGACACAGAAACATCTCGAGTCTGC
AGCAGCATTCCTGACAACATGAAGTTGCATCCGCTGAACA
GAACAGCTCTGGTGTTGACCTGGGACCGACCCTCAGCCGT
CTACCACCCACCTATTGTCGGCTTCCTTGTCTCCTACAGC
TGGGTGAAGGATGAAATGCCATTCGAGAAGACCTTCACAC
AGAGCAGCGAACACAGCACGAGGGCAGTCATCACACTCGT
GTCTCCAGATGTCCTGTATCTCTTCAGAGTGCAAGCTTTG
TGTCAGAGAGACCAGCGCAGTGACTTCAGCCAGACTCTTC
TATTCAAAGCAAACACCACAAGGATATTCGAAGGCACAAG
GATTGTAAAAACCGGCATGCCTACAGTTTCTCCGGCCTCT
TCAGCAGACATGGCCCCCATCAGCTCAGGCTCTTCAACCT
GGACGTCGGCTGGCCTCCCCTTCTCCTTCGTCTCTATGGC
CACAGGAATGGGTCCACCATCCAGTGGAGGACAGGCCACC
GTCGCTTCTGTGGTGACCAGCACATTATTAGCCGGCCTGG
GCTTCAGCGGCAGTGTCATTTCATCCCTTCCTGGATCCTT
CTGGCCAACGCATTCAACAAATACAGGCCCGTCGCCTACT
CAACATCCAGCCACTCCAACAGCCGAAAACAGCCCATCTG
AAGACAGCACCGACACTCAGAACAAACTCGAAGAAGAAGA
AGAGCATAAAAAAGAGGACGATGAAGAGGAGGAGGAGGAA
GAGGAAGAAGAAGAACAGAGAGATGAGGAGAAGAAGAAGA
AGGGGAAAGATGTGACGGTCAAGGATAAAAAGCAGACAGT
GCAAAAGCCCACCGCTCCAATCCCGACATCTAAACACAGA
GATCGAGAGAGACCGGATGCTGAGAGTTCTACACTGACCC
CTGCTGAAGTGGAGGAGCAGGTTTCTGGAGCCACTGAGAG
GCCGGATGCTGAGGATTCGTCAAAAGCGACATGGCAGGAT
GATAATGATATGCAGATTCCCTCCAGCTCTACAGAAAGCA
GCAAACTGAGTGACGAGGAGAAAGCAAACTGGCCATACTA
CATTAACACTGAGAGAAACAGCATCTCCACTGTCAGCCGG
GACTCAGTGTCGTCCTCCAGCCGGATGGAGTGGATCATCC
CTCTGATGGTGGTCTCTGCCCTCACTCTGCTCTGTCTCAT
CATGCTGCTGGCCGTCCTGGTCTACTGGAGGAGATTCTTC
CAGACGGCACATTTCTATATTGAAGACAGAAACTCCCCCA
GAGTGATCCACAATGACAGCTTCCCCATCATCTCTACAGC
CGATGACCTGGAGGCCATGCCAGTCCGGCAGTTCATCAAA
CACATCATGGAGCTTCACTCCAACAACCGGCATGGCTTTT
CTCAGGAGTTCGATGAGGTCCAACACTGCACATCAGAAAT
GAAGATTACAGCAGAACACTCCAATCACCCAGAAAACAAG
CACAAAAACAGATACATCAACATCGTAGCCTATGATCACA
GCAGAGTGAAGTTACAGCAACTGCCTGGGAAAGACTCCAA
GCACAGTGACTACATCAATGCCAACTATGTGGACGGGTAT
AAAAGAGCCAGGGCTTACATCGCAGCTCAAGGCCCTCTCA
AGTCCACGTTTGAGGATTTTTGGAGAATGATCTGGGAACA
AAACACCACTGTGATTGTCATGATCACAAATTTAGTGGAG
AAAGGCAGGAGGAAATGTGATCAGTACTGGCCGTCGGAGA
ACAGCGAGGTGTATGGTAACATAATGGTGACTCTGAAGAG
CACTAAAGTTTATGCTTACTATACACTCCGACATTTCATC
GTACGCAACAGCAAACTGAAAAAGGGTCAGAAGGGAAGGC
AGAACGAGCGTCTGGTGCTTCAATATCATTACACACAGTG
GCCAGACATGGGAGTTCCTGAATACACTTTACCAGTCCTC
AAATTCATCAGTCGCTCTACAGTGACGCACGCATCCAGCA
CAGGTCCCGTTCTGGTGCACTGCAGTGCTGGAGTGGGCAG
AACAGGCACATATATAGTGATCGACAGCATGTTGAAGCAG
ATAAAGGACAGAGGCAGCGTCAATGTCCTGGGATTCCTGA
AACACATCCGAGAGCAGAGAAACTACCTGGTCCAGACTGA
GGAGCAGTTTATCTTCATCCATGACGCACTAATGGAAGCA
GTGCTCAGTAAAGACACCGAGGTTTCAGCCTGGCAGCTCC
ACACGTACACGAACAGCCTCCTGACGCCGAGCCCCACAGG
ACACACACGCATGGACAAACACTTTAAGTTGTTGACGCAG
TGCAATGCTCATCTCGCCGAGTGTTTGAGTGGCCAGAAAG
AGTGTAATAAAGAGAAGAACCGCACATCCGCCGTCTTGCC
AACTGAACGGGCTCGTGTGGCGCTCTCTCCTCTTCCAGGC
CTGAAGGGAACAGACTACATCAATGCCTCTTACATCATGG
GTTATTACAGGAGCAACGAGTTCATCATCACCCAGCATCC
TTTGCCTCACACCACCACCGACTTCTGGAGGATGATTTGG
GATCATAATGCGCAGGTTATCGTGATGCTGCCGGATAACC
TCGGCCTTACTGAGGATGAGTTTGTGTACTGGCCCAGCAG
AGAGGAGCCCATGAACTGCATAGCCTTCACTGTCACCCTC
ATTAACACCGACAGACTTTGCTTGTCCAATGAGGAACAGC
TCATCATCCACGACTTCATCCTGGAAGCCACGCAGGACGA
TTATGTGCTAGAAGTCCGACATTTCCAGTGTCCGAACTGG
CCAGATCCCGATGCCTCTATCAGCAGCACATTTGAGCTTA
TCAACATCATCAAAGAAGAGGCAATGACACGGGACGGTCC
CACCATCGTGCACGATGAGTTTGGCGCAGTCTCTGCCGGG
ACGTTTTGTGCTCTGACAACACTTTCCCAACAGCTGGAGA
ACGAGAGCGCTGTGGATGTCTATCAAGTGGCCAAAATGAT
CAATCTAATGAGGCCTGGTGTCTTCACTGAAATCGAGCAC
TACCACTACCTTTACCAGGCAATGCTCAGCCTTGTCAGCA
GTAAAGACTTCAGATTTGGCTTCAACTACATGGACAAATT
CGCTGGAAAAGCGGATGAATCCAACCAGGCTGAGAGCATG
GAGTCTTTGGTGTGAAGTTTTCGGAAAATGAAACGGAACA
AAGTGGTTCCTTGAACTTTCCATGAGGCCTTTTTTTCCCC
AGACTCTTGGTGAAATGAAAAAAAAAGAACAACAAAAAAG
AGCTTTTATAAACTGATAAAAATAAATTCTTTTGATATTT
ATTTTTGCTGCTTTTTGTTATCCTGCTGAGCGCCACAATC
TGCTCTCCAAAAAACACATGCACACGCACACACTGATAAA
CACACACACACACACACCATCTTCTTTGCACTACACTGTC
AGTGTTACTACTTGATGCCTAGCTGATTATTGATAATTGT
GTTGATAATGTTTTCTTTGAGTATCACTTTATTGCTGCCG
ATAAAGTCTACAGACATGTGAGGGTGATCAGCGACAGCAC
ATTAACACACACATCAGCCTCATAACCATACAAAACTGTA
CACAGCAGCTCTTAATGCTCATCATGATGCGACCTTTAAC
CGTCAAGCATTGTGACTTGTTAGATTAATATGTTCTCTTT
TTTTTTATTTATTATTAAGATATGCCATTTTATGTCTAAC
TTATATACATTATTTCAGTGTGGTATCATAACAGCAACTG
TGAACATATATTGTTATCAGTAGCATTTCTATTGTTTTGT
AATATATAAAGATATTGATCAAAAA
Related Transcripts
Transcripts related to ca16b
Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ca16b-201	Ensembl	5,305 nt
mRNA	ca16b-203 (1) Ensembl	Ensembl	632 nt	Select Tool ZFIN BLAST
mRNA	ca16b-204 (1) Ensembl	Ensembl	3,741 nt	Select Tool ZFIN BLAST
ncRNA	ca16b-002 (1) Ensembl	Ensembl	1,123 nt	Select Tool ZFIN BLAST
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations