Gene

ca16b

ID
ZDB-GENE-080818-1
Name
carbonic anhydrase XVI b
Symbol
ca16b Nomenclature History
Previous Names
  • zCA16b (1)
  • wu:fb17c03 (1)
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to localize to integral component of membrane. Is expressed in central nervous system; neural rod; neural tube; and pronephric duct. Orthologous to human PTPRG (protein tyrosine phosphatase receptor type G).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from Rauch et al., 2003
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ca16b Human Ortholog
No data available
Associated With ca16b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Active_site IPR016130 Protein-tyrosine phosphatase, active site
Domain IPR000242 Tyrosine-specific protein phosphatase, PTPase domain
Domain IPR000387 Tyrosine-specific protein phosphatases domain
Domain IPR001148 Alpha carbonic anhydrase domain
Domain IPR003595 Protein-tyrosine phosphatase, catalytic
Domain IPR003961 Fibronectin type III
Domain IPR041887 Receptor-type tyrosine-protein phosphatase, carbonic anhydrase domain
Family IPR050348 Protein-Tyrosine Phosphatase
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR029021 Protein-tyrosine phosphatase-like
Homologous_superfamily IPR036116 Fibronectin type III superfamily
Homologous_superfamily IPR036398 Alpha carbonic anhydrase domain superfamily
Domain Details Per Protein
Protein Length Alpha carbonic anhydrase domain Alpha carbonic anhydrase domain superfamily Fibronectin type III Fibronectin type III superfamily Immunoglobulin-like fold Protein-Tyrosine Phosphatase Protein-tyrosine phosphatase, active site Protein-tyrosine phosphatase, catalytic Protein-tyrosine phosphatase-like Receptor-type tyrosine-protein phosphatase, carbonic anhydrase domain Tyrosine-specific protein phosphatase, PTPase domain Tyrosine-specific protein phosphatases domain
UniProtKB:A0A8M1QQH6 1382
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ca16b-201 (1) Ensembl 5,305 nt
mRNA ca16b-203 (1) Ensembl 632 nt
mRNA ca16b-204 (1) Ensembl 3,741 nt
ncRNA ca16b-002 (1) Ensembl 1,123 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations