Transcript

si:ch211-116o3.7-001

ID

ZDB-TSCRIPT-131113-4331

Name

si:ch211-116o3.7-001 Nomenclature History

Previous Names

ch211-116o3.7-001

Transcript Type

lincRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

si:ch211-116o3.7 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155909 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000155909.3|gene_biotype:processed_transcript|ENSDARG00000098034.3 transcript_biotype:lincRNA  ncrna chromosome:GRCz11:15:15708065:15711173:-1
CACACAGACATATATACACCCCAGCCGGCACACGACCGAC
CTTCAACGTTGAAATATGGTTGAAATAAGGTCAGTTGTGT
TTTGAACGTTGAAATAATGTTGATAGAACGTTTAATGTTG
AATGGTTGAAAAACAGCCTGCATATGACAAGGCTTCAACG
TTGAAATGTGGTTGAAAATATGTCAGTTGTTGCTTTAATG
TTGAAACAATGTTGAATGATAAATGGTTGAAAAAAGTTAC
AGAAATCCTTGTACAAATCAACGTTGACATTTTTTTATCA
TGATCTGTATGTTGAATTAACGTCATGGCTTCACCCAACA
TTCAACATGTTTGGTTACCATGGTATTGGAGGACTCCGCG
CACGCGGCCACGCGCAGCGCTTTACTTCACGTAATTACGA
ACACCTGACCTGCAGTGCAGCAGAATTCAGAGACATGTAA
CTTACTCCAGAGACGCACTAACTTGCACAGCATTGAATGG
AAAAGGCTTTGTCCATGTCCAGTTGAGGGCATCAAGAACA
CGCAGATGGCCTAAACCTGTGTCAGCCTGGACAGACTGCC
GTTCTGCTACTCCACACCAAGGCTTTTGTATAGATGTCTT
GACTGCTACTGTGTTCTCTAAAGGTTTTCTGGAAGCTCCA
TTTGAGGGCATCAAGGACATACTGATGGCCTAAACCAGTG
TCAGCCTAGACAGACAGACATCTATTGCAGTTCTGCTACA
CAAGACCAAACTCTCTGCTTTTGTATGGATGTCTGACTAG
TACGGTGTTCTCTAAAGGTGTAACTGGAGCAAAACAACAG
CACCCGTTACAGTGACATTTGTGTTCATAAAAGATAGTGA
TATATCAGGTGTAGTAACAGGTCCAGTACATTTGTCATAA
AGGTTAAATCACAGTAAGTACTGTAAAAATAACTTGTTTG
CCTTTGCCACAACAGGTCATGGTGTGTACTTACTGCTCGT
AATAAACACACACGCTGATCTGATGCGGGAGAGATATATG
CAAACACATTAGTATTTACTGTTTTGTTTTGCCTCACTAA
AGTGTTGTTGGAGCTTGGTATGTTCACAGTTGAAATTACT
GAAGTCACATGGAACGTTTTGACAATGTGTTTTGTGCCTT
ATTATGACAATGACCATCTTGGGACCATTGCTGTCTGTAG
AGGATGAGGCATTTAATCTAAAATATTTTAGTTTGTGTTC
TGAAGATTAACAAGTCTCTGGGATGACACAAGTAATTAAT
AACAGAACCTATATGAACACTTAATGTGACATGTAATAGT
GAAATAGTGGTCCTACATTCACAAATGTGAGCCATTATTA
TAAGACCCATGTGAACATGCAATTTTTATGATACTAATAA
TAATAATGGAATAACAAATTGCTTTTACTGTTGTGTTTGA
TTTACTGAAATATTTGTCTACATGTTCCACTGTCACAGGT
GCTCAGTTTTGCTGCAGTAATGCTAAACACAATAGATGTA
CTTTATACAAAAAAAAAAAAAAAAA

OTTDART00000057112 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057112|OTTDARG00000039825|ZDB-GENE-131119-6 si:ch211-116o3.7|no_translation CH211-116O3.7-001 LG_ CR848840.14 Danio rerio processed_transcript NOVEL, 1505 bp
CACACAGACATATATACACCCCAGCCGGCACACGACCGAC
CTTCAACGTTGAAATATGGTTGAAATAAGGTCAGTTGTGT
TTTGAACGTTGAAATAATGTTGATAGAACGTTTAATGTTG
AATGGTTGAAAAACAGCCTGCATATGACAAGGCTTCAACG
TTGAAATGTGGTTGAAAATATGTCAGTTGTTGCTTTAATG
TTGAAACAATGTTGAATGATAAATGGTTGAAAAAAGTTAC
AGAAATCCTTGTACAAATCAACGTTGACATTTTTTTATCA
TGATCTGTATGTTGAATTAACGTCATGGCTTCACCCAACA
TTCAACATGTTTGGTTACCATGGTATTGGAGGACTCCGCG
CACGCGGCCACGCGCAGCGCTTTACTTCACGTAATTACGA
ACACCTGACCTGCAGTGCAGCAGAATTCAGAGACATGTAA
CTTACTCCAGAGACGCACTAACTTGCACAGCATTGAATGG
AAAAGGCTTTGTCCATGTCCAGTTGAGGGCATCAAGAACA
CGCAGATGGCCTAAACCTGTGTCAGCCTGGACAGACTGCC
GTTCTGCTACTCCACACCAAGGCTTTTGTATAGATGTCTT
GACTGCTACTGTGTTCTCTAAAGGTTTTCTGGAAGCTCCA
TTTGAGGGCATCAAGGACATACTGATGGCCTAAACCAGTG
TCAGCCTAGACAGACAGACATCTATTGCAGTTCTGCTACA
CAAGACCAAACTCTCTGCTTTTGTATGGATGTCTGACTAG
TACGGTGTTCTCTAAAGGTGTAACTGGAGCAAAACAACAG
CACCCGTTACAGTGACATTTGTGTTCATAAAAGATAGTGA
TATATCAGGTGTAGTAACAGGTCCAGTACATTTGTCATAA
AGGTTAAATCACAGTAAGTACTGTAAAAATAACTTGTTTG
CCTTTGCCACAACAGGTCATGGTGTGTACTTACTGCTCGT
AATAAACACACACGCTGATCTGATGCGGGAGAGATATATG
CAAACACATTAGTATTTACTGTTTTGTTTTGCCTCACTAA
AGTGTTGTTGGAGCTTGGTATGTTCACAGTTGAAATTACT
GAAGTCACATGGAACGTTTTGACAATGTGTTTTGTGCCTT
ATTATGACAATGACCATCTTGGGACCATTGCTGTCTGTAG
AGGATGAGGCATTTAATCTAAAATATTTTAGTTTGTGTTC
TGAAGATTAACAAGTCTCTGGGATGACACAAGTAATTAAT
AACAGAACCTATATGAACACTTAATGTGACATGTAATAGT
GAAATAGTGGTCCTACATTCACAAATGTGAGCCATTATTA
TAAGACCCATGTGAACATGCAATTTTTATGATACTAATAA
TAATAATGGAATAACAAATTGCTTTTACTGTTGTGTTTGA
TTTACTGAAATATTTGTCTACATGTTCCACTGTCACAGGT
GCTCAGTTTTGCTGCAGTAATGCTAAACACAATAGATGTA
CTTTATACAAAAAAAAAAAAAAAAA

Related Transcripts

Transcripts related to si:ch211-116o3.7

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-116o3.7-001	Ensembl	1,505 nt
lincRNA	si:ch211-116o3.7-002 (1) Ensembl	Ensembl	1,155 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-004 (1) Ensembl	Ensembl	795 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-006 (1) Ensembl	Ensembl	408 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-007 (1) Ensembl	Ensembl	869 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-008 (1) Ensembl	Ensembl	809 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-009 (1) Ensembl	Ensembl	822 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-116o3.7-003 (1) Ensembl	Ensembl	554 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-116o3.7-005 (1) Ensembl	Ensembl	1,152 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations