Transcript

si:ch211-116o3.7-005

ID

ZDB-TSCRIPT-131113-1139

Name

si:ch211-116o3.7-005 Nomenclature History

Previous Names

ch211-116o3.7-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch211-116o3.7 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000157084 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000157084.3|gene_biotype:processed_transcript|ENSDARG00000098034.3 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:15:15708388:15710785:-1
ACGTAATTACGAACACCTGACCTGCAGTGCAGCAGAATTC
AGAGGTAAGCGTGTTTTTAGATGCTTTAACGTTTTATTTA
CCCCCCGATTTTGTCAGTGTATCTTAAACGTGACTTTTGA
GGTGTAGTGTTTCGAATTTTGAAGCATTTAAAACTTTCCA
GCTTGTTTTTAGTCTTGTTTGCACTCCGGTGACGCGCAGC
TAACCTCGAGGTAATGTCACATGTTTAACGTTAGTCTAAA
TGAGCGTTTTTATGGCAAATTCAAAGCGATAAACTCCAAA
CGCAGTTTAAAGTTACTGAGCAACGTTATAAAACAATATC
CATTTTATACGCTGCATTATTAGTGTTATTATTACAAAGT
TAACTGCTGTCGTTTCACTGTTGTTGTTGTTTTTGCTTTT
AGACATGTAACTTACTCCAGAGACGCACTAACTTGCACAG
CATTGAATGGAAAAGGCTTTGTCCATGTCCAGTTGAGGGC
ATCAAGAACACGCAGATGGCCTAAACCTGTGTCAGCCTGG
ACAGACTGCCGTTCTGCTACTCCACACCAAGGCTTTTGTA
TAGATGTCTTGACTGCTACTGTGTTCTCTAAAGGTTTTCT
GGAAGCTCCATTTGAGGGCATCAAGGACATACTGATGGCC
TAAACCAGTGTCAGCCTAGACAGACAGACATCTATTGCAG
TTCTGCTACACAAGACCAAACTCTCTGCTTTTGTATGGAT
GTCTGACTAGTACGGTGTTCTCTAAAGGTGTAACTGGAGC
AAAACAACAGCACCCGTTACAGTGACATTTGTGTTCATAA
AAGATAGTGATATATCAGGTGTAGTAACAGGTCCAGTACA
TTTGTCATAAAGGTTAAATCACAGTAAGTACTGTAAAAAT
AACTTGTTTGCCTTTGCCACAACAGGTCATGGTGTGTACT
TACTGCTCGTAATAAACACACACGCTGATCTGATGCGGGA
GAGATATATGCAAACACATTAGTATTTACTGTTTTGTTTT
GCCTCACTAAAGTGTTGTTGGAGCTTGGTATGTTCACAGT
TGAAATTACTGAAGTCACATGGAACGTTTTGACAATGTGT
TTTGTGCCTTATTATGACAATGACCATCTTGGGACCATTG
CTGTCTGTAGAGGATGAGGCATTTAATCTAAA

OTTDART00000057119 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057119|OTTDARG00000039825|ZDB-GENE-131119-6 si:ch211-116o3.7|no_translation CH211-116O3.7-005 LG_ CR848840.14 Danio rerio processed_transcript NOVEL, 1152 bp
ACGTAATTACGAACACCTGACCTGCAGTGCAGCAGAATTC
AGAGGTAAGCGTGTTTTTAGATGCTTTAACGTTTTATTTA
CCCCCCGATTTTGTCAGTGTATCTTAAACGTGACTTTTGA
GGTGTAGTGTTTCGAATTTTGAAGCATTTAAAACTTTCCA
GCTTGTTTTTAGTCTTGTTTGCACTCCGGTGACGCGCAGC
TAACCTCGAGGTAATGTCACATGTTTAACGTTAGTCTAAA
TGAGCGTTTTTATGGCAAATTCAAAGCGATAAACTCCAAA
CGCAGTTTAAAGTTACTGAGCAACGTTATAAAACAATATC
CATTTTATACGCTGCATTATTAGTGTTATTATTACAAAGT
TAACTGCTGTCGTTTCACTGTTGTTGTTGTTTTTGCTTTT
AGACATGTAACTTACTCCAGAGACGCACTAACTTGCACAG
CATTGAATGGAAAAGGCTTTGTCCATGTCCAGTTGAGGGC
ATCAAGAACACGCAGATGGCCTAAACCTGTGTCAGCCTGG
ACAGACTGCCGTTCTGCTACTCCACACCAAGGCTTTTGTA
TAGATGTCTTGACTGCTACTGTGTTCTCTAAAGGTTTTCT
GGAAGCTCCATTTGAGGGCATCAAGGACATACTGATGGCC
TAAACCAGTGTCAGCCTAGACAGACAGACATCTATTGCAG
TTCTGCTACACAAGACCAAACTCTCTGCTTTTGTATGGAT
GTCTGACTAGTACGGTGTTCTCTAAAGGTGTAACTGGAGC
AAAACAACAGCACCCGTTACAGTGACATTTGTGTTCATAA
AAGATAGTGATATATCAGGTGTAGTAACAGGTCCAGTACA
TTTGTCATAAAGGTTAAATCACAGTAAGTACTGTAAAAAT
AACTTGTTTGCCTTTGCCACAACAGGTCATGGTGTGTACT
TACTGCTCGTAATAAACACACACGCTGATCTGATGCGGGA
GAGATATATGCAAACACATTAGTATTTACTGTTTTGTTTT
GCCTCACTAAAGTGTTGTTGGAGCTTGGTATGTTCACAGT
TGAAATTACTGAAGTCACATGGAACGTTTTGACAATGTGT
TTTGTGCCTTATTATGACAATGACCATCTTGGGACCATTG
CTGTCTGTAGAGGATGAGGCATTTAATCTAAA

Related Transcripts

Transcripts related to si:ch211-116o3.7

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-116o3.7-001 (1) Ensembl	Ensembl	1,505 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-002 (1) Ensembl	Ensembl	1,155 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-004 (1) Ensembl	Ensembl	795 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-006 (1) Ensembl	Ensembl	408 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-007 (1) Ensembl	Ensembl	869 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-008 (1) Ensembl	Ensembl	809 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-116o3.7-009 (1) Ensembl	Ensembl	822 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-116o3.7-003 (1) Ensembl	Ensembl	554 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-116o3.7-005	Ensembl	1,152 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations