Transcript

shank1-201

ID
ZDB-TSCRIPT-131113-3595
Name
shank1-201 Nomenclature History
Previous Names
  • shank1-001
  • dkey-105i19.4-001
  • si:dkey-105i19.4-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000154811 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000154811.2|gene_biotype:protein_coding|ENSDARG00000060539.7 transcript_biotype:protein_coding  cdna chromosome:GRCz11:3:30714111:30861177:-1
GAGGATATGCATTGGCTCCCAGCGCTCACCGGCTCACGGG
ACACACTCTAAAATGTAATTTCCAAAGGCCTAATTGTTGC
CGCGGTGATTTTATTTTCCTCCATTTCATTTTTCTTTCTT
TTTTGGTTTATTTGCCCTCTCTCCTCTTCTCTTTTCGCCG
TTATTCTGCTGGATTTTCCCCTTCTTTTATAACTGCTATC
ATTCTCTCCATTTACAAAGGAGGGATCTACAAATAAAGGC
AACCACAGCAAGACATGTGTCTCTGGGGATGATGCCGTTG
CCGCTGGTGCCACTCTCCCTGTCGCCATGACGATGCCGCT
CAGCCCCCTCTCCAGCGACGAGGAGCAGCAAAGGATGCTG
GGAAACAGTCAACACCTTTATCCAGGGGCGGAAGAGGAAG
AGGAGGAGGAAGAGGAAATGGACGATGATGGCATGGACGA
GGAAGGTGAGGAGGAGAACGGAGAGCTGGAGATGGACGAT
GAAGAGGAAGTGGACGATGAAGATGACATCAGGCGAGGAC
CAGGGCATTTGAGAGGAGGCAGGGAAGAGGGGCACAGGCA
AAAAGGCACAATGGCTGGACGACTCCCAGGAGACAGACCC
ATTCGACCCGGCAACCCGGGCCATGCGGCCAACCCTTATT
CGTCCAATCCTGGACCAACCCACCAAACGTCAACCAATCA
GCAGCAGCAGCAACCGCAGAGGAAGCTACGAGAGCGGAGC
TCCAGCAACGCACCTGACGACACACACGTAGCTCTGATGG
TCTTTCGAATTGGCATTCCTGATATTAAACAGACGAAATG
TCTGAGGTTCAACCCTGATGCAACCGTATGGAAGGCGAAG
CAGCAGGTGATGTGCAGTCTGACTGAGTCTCTGAGGGATG
TTTTAAACTATGGTCTTTTTCAACCTGCCACTGACGGGCA
CGATGCCAAGTTCCTGGAGGAGGAGAGGCCGCTCCGCGAG
TACCCACAATCCTTTGAGAAAGGAGTACCTTACCTGGAGT
TCCGATATAAAACCAGGGTGTACAAACAGACAAATCTAGA
TGAGAAGCAGCTGGCCAAACTACATACTAAGGCCAGTCTG
AAGAAGTTCATGGACTACATCCAGACCAGCGCTGTGGAAA
AGGTAGCCAAACTTATTGATAAAGGACTTGACCCCAACTA
CCACGACCCTGATACAGGAGAGACTCCACTCACTCTGGCC
GTACAGACGGAGCCGGGCGGAAGTGAGATCATCAGGGTGC
TGGTGATGGGTGGAGCCCACATTGACTTTAGGGCGAGAGA
TGGCTTGACCCCTCTGCACAAGGCTGTCAGAGCACATGCA
CACACTGCCCTACTGACGCTGTTGTCTTTGGGGGCGTCTT
CTGATTATAAGGACAGCCGTGGGCTGACACCACTGTACCA
CACTGTGCTGATAGGGGGCGACACCTCCTGCTGCGAGACC
CTGCTATACCACAGAGCCAGGCTGGGGCTCCGCGATGAGA
ACGGCTGGGATGAGACACATCAGGCGTGTCAAAATGGGAA
CTCTCAACATTTAGAGCACCTGCTTTTTTATGGTGCAGAC
TCCTCATCCCAGAATGCCTCAGGAAACACTGCCCTGCACA
TATGTGCTTTATATAACAAGGAGAGCTGTGCCCGCATCCT
GCTTTATCGAGGAGCTAAGAAGGACACAAAGAATAACAGT
GGGCAGAACTCCTTCCAGGTGGCTGTGATGTCTGGCCATT
TTGAGCTTGGAGAAATAATTAAAAACCACCGTGAATCAGA
TGTAGTCCCCTTTTTGGAGTCTCCTAAATATGCCCCGCAA
AGGAGGGAGAGCTCACGGACACTTGGACTGCCTCATCCGC
ACCCCTTTTTACGGGCCAACAGTGATAACAGCATGAATGT
GCCAGACTGGATTGCCTTTCCCAATGCTGCAGGATCAAGC
ATCGTCTCTGTACAGGGTCTAAAGCATGGCGGCACCTTAC
GTAGCTCCAGCAGTCCCCGTGGAGCCCGAACACGTTCCCC
ATCTCGTGGCCGAACAGGTGACCGGGACGATCGGAGCCGG
CAAACACGTGGAAGACAAGGAGCGGGATCCATCAGTAGTC
AGGGCACAGCCAGCGGGCAGCGGCGGCGTCTCTACAGCGC
CGTTCCTGGCCGAGTTTTTGTTGCCACTCGCTCACACTCG
GCCCAGGGTGACCGCGAAATCAGCTTCAACAAGGGAGACA
AAGTCAAAGTGCTGAGTGTGGGTGAAGGAGGCTATTGGGA
AGGGACGGTTCGAGGACGCACAGGCTGGTTCCCCTCAGAC
TGCGTGGAGGAAGTTGCTCTCCGTAGCCTGGAATCTCGTT
CAGAGAGCCGCAGTGAGAGAGCCAAGAGACTCTTCCGGCA
TTATACTGTTGGATCCTACGACAGCTTCGATGCGCCCAGT
GACTACATAATCAAGGAGAAGACAGTCCTCCTGCAGAAAA
AAGACAATGAAGGTTTTGGCTTTGTGCTGAGAGGAGCCAA
GGCTCAGACCCCTATAGAAGAGTTCACTCCCACCCCAGCC
TTTCCAGCACTGCAGTACCTTGAGTCTGTCGACGAGGGAG
GCGTGGCCTGGAGAGCTGGTCTGCGAATGGGAGACTTCCT
TATAGAGGTGAATGGTCAGAATGTGGTTAAGGTGGGACAC
AGGCAGGTGGTCAATATGATCAGGCAAGGCGGTAACAGTC
TCATGGTCAAGGTTGTCATGGTTACTCGAAATCCTGATAT
GGAGGAAGGGGTCAGAAAGAAAATCCCACAGCAGAGTAAA
AGACTGAGCACACCGGCTATCGCTCTGCGCTCCAAATCCA
TGACATCAGAGCTGGAAGAGATGGAAGTTCCACACTGTCA
CTACCAGCACCCCCACTACAGGTAA

OTTDART00000053499 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000053499|OTTDARG00000037470|ZDB-GENE-130530-691 shank1|OTTDARP00000042077 DKEY-105I19.4-001 LG_ BX682556.5 Danio rerio protein_coding PUTATIVE, 2865 bp
GAGGATATGCATTGGCTCCCAGCGCTCACCGGCTCACGGG
ACACACTCTAAAATGTAATTTCCAAAGGCCTAATTGTTGC
CGCGGTGATTTTATTTTCCTCCATTTCATTTTTCTTTCTT
TTTTGGTTTATTTGCCCTCTCTCCTCTTCTCTTTTCGCCG
TTATTCTGCTGGATTTTCCCCTTCTTTTATAACTGCTATC
ATTCTCTCCATTTACAAAGGAGGGATCTACAAATAAAGGC
AACCACAGCAAGACATGTGTCTCTGGGGATGATGCCGTTG
CCGCTGGTGCCACTCTCCCTGTCGCCATGACGATGCCGCT
CAGCCCCCTCTCCAGCGACGAGGAGCAGCAAAGGATGCTG
GGAAACAGTCAACACCTTTATCCAGGGGCGGAAGAGGAAG
AGGAGGAGGAAGAGGAAATGGACGATGATGGCATGGACGA
GGAAGGTGAGGAGGAGAACGGAGAGCTGGAGATGGACGAT
GAAGAGGAAGTGGACGATGAAGATGACATCAGGCGAGGAC
CAGGGCATTTGAGAGGAGGCAGGGAAGAGGGGCACAGGCA
AAAAGGCACAATGGCTGGACGACTCCCAGGAGACAGACCC
ATTCGACCCGGCAACCCGGGCCATGCGGCCAACCCTTATT
CGTCCAATCCTGGACCAACCCACCAAACGTCAACCAATCA
GCAGCAGCAGCAACCGCAGAGGAAGCTACGAGAGCGGAGC
TCCAGCAACGCACCTGACGACACACACGTAGCTCTGATGG
TCTTTCGAATTGGCATTCCTGATATTAAACAGACGAAATG
TCTGAGGTTCAACCCTGATGCAACCGTATGGAAGGCGAAG
CAGCAGGTGATGTGCAGTCTGACTGAGTCTCTGAGGGATG
TTTTAAACTATGGTCTTTTTCAACCTGCCACTGACGGGCA
CGATGCCAAGTTCCTGGAGGAGGAGAGGCCGCTCCGCGAG
TACCCACAATCCTTTGAGAAAGGAGTACCTTACCTGGAGT
TCCGATATAAAACCAGGGTGTACAAACAGACAAATCTAGA
TGAGAAGCAGCTGGCCAAACTACATACTAAGGCCAGTCTG
AAGAAGTTCATGGACTACATCCAGACCAGCGCTGTGGAAA
AGGTAGCCAAACTTATTGATAAAGGACTTGACCCCAACTA
CCACGACCCTGATACAGGAGAGACTCCACTCACTCTGGCC
GTACAGACGGAGCCGGGCGGAAGTGAGATCATCAGGGTGC
TGGTGATGGGTGGAGCCCACATTGACTTTAGGGCGAGAGA
TGGCTTGACCCCTCTGCACAAGGCTGTCAGAGCACATGCA
CACACTGCCCTACTGACGCTGTTGTCTTTGGGGGCGTCTT
CTGATTATAAGGACAGCCGTGGGCTGACACCACTGTACCA
CACTGTGCTGATAGGGGGCGACACCTCCTGCTGCGAGACC
CTGCTATACCACAGAGCCAGGCTGGGGCTCCGCGATGAGA
ACGGCTGGGATGAGACACATCAGGCGTGTCAAAATGGGAA
CTCTCAACATTTAGAGCACCTGCTTTTTTATGGTGCAGAC
TCCTCATCCCAGAATGCCTCAGGAAACACTGCCCTGCACA
TATGTGCTTTATATAACAAGGAGAGCTGTGCCCGCATCCT
GCTTTATCGAGGAGCTAAGAAGGACACAAAGAATAACAGT
GGGCAGAACTCCTTCCAGGTGGCTGTGATGTCTGGCCATT
TTGAGCTTGGAGAAATAATTAAAAACCACCGTGAATCAGA
TGTAGTCCCCTTTTTGGAGTCTCCTAAATATGCCCCGCAA
AGGAGGGAGAGCTCACGGACACTTGGACTGCCTCATCCGC
ACCCCTTTTTACGGGCCAACAGTGATAACAGCATGAATGT
GCCAGACTGGATTGCCTTTCCCAATGCTGCAGGATCAAGC
ATCGTCTCTGTACAGGGTCTAAAGCATGGCGGCACCTTAC
GTAGCTCCAGCAGTCCCCGTGGAGCCCGAACACGTTCCCC
ATCTCGTGGCCGAACAGGTGACCGGGACGATCGGAGCCGG
CAAACACGTGGAAGACAAGGAGCGGGATCCATCAGTAGTC
AGGGCACAGCCAGCGGGCAGCGGCGGCGTCTCTACAGCGC
CGTTCCTGGCCGAGTTTTTGTTGCCACTCGCTCACACTCG
GCCCAGGGTGACCGCGAAATCAGCTTCAACAAGGGAGACA
AAGTCAAAGTGCTGAGTGTGGGTGAAGGAGGCTATTGGGA
AGGGACGGTTCGAGGACGCACAGGCTGGTTCCCCTCAGAC
TGCGTGGAGGAAGTTGCTCTCCGTAGCCTGGAATCTCGTT
CAGAGAGCCGCAGTGAGAGAGCCAAGAGACTCTTCCGGCA
TTATACTGTTGGATCCTACGACAGCTTCGATGCGCCCAGT
GACTACATAATCAAGGAGAAGACAGTCCTCCTGCAGAAAA
AAGACAATGAAGGTTTTGGCTTTGTGCTGAGAGGAGCCAA
GGCTCAGACCCCTATAGAAGAGTTCACTCCCACCCCAGCC
TTTCCAGCACTGCAGTACCTTGAGTCTGTCGACGAGGGAG
GCGTGGCCTGGAGAGCTGGTCTGCGAATGGGAGACTTCCT
TATAGAGGTGAATGGTCAGAATGTGGTTAAGGTGGGACAC
AGGCAGGTGGTCAATATGATCAGGCAAGGCGGTAACAGTC
TCATGGTCAAGGTTGTCATGGTTACTCGAAATCCTGATAT
GGAGGAAGGGGTCAGAAAGAAAATCCCACAGCAGAGTAAA
AGACTGAGCACACCGGCTATCGCTCTGCGCTCCAAATCCA
TGACATCAGAGCTGGAAGAGATGGAAGTTCCACACTGTCA
CTACCAGCACCCCCACTACAGGTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations