Transcript

svila-207

ID

ZDB-TSCRIPT-130528-78

Name

svila-207 Nomenclature History

Previous Names

svil-003
svila-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

svila (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000153195 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000153195.2|gene_biotype:protein_coding|ENSDARG00000055075.9 transcript_biotype:nonsense_mediated_decay gene_symbol:svila cdna chromosome:GRCz11:12:23923325:23932015:1
ATGAAGTTTACCTGTGGCAGGGCTGGTGGCCTCAGGACAG
TGAAAGCACAGGCTCAGCTCGCATACGGTGGGACTCTGAC
AGGAAGTGTGCAATGGAAACTGTGCTCCAGTATAGCAAAG
AAAAAAATGAGAAAAAGACACCAAAATCCTACCTGATCCA
TGCAGGACTGGAGCCTCTTACATTCACCAACATGTTTCCC
AGCTGGGAACACAGAGAGGACATCGCTGAAATCACAGAGA
AGGAGGCCGAAGTATGTCATCAGATCATTCTTGTTGAAGA
TGTCTTGAGCCGACTCTGCAAGACCACTTACCCACTGGCT
GAACTAAAAGCACGTCCCTTACCGGAAGGTGTCGACCCTC
TACGTCTTGAAACCTACTTATCAGATGAGGACTTTGAGTC
TTGCGTCTGACTGAGGTTAATTTTTCCCTTCACATGCCAG
GGTGTAGGGGCTTCTGGGAAGAAAGCTTTGGAGATGACGA
GAAGTGAATATGAGGCACTGCCTGGATGGAAGCAAGTGAA
TGTGAAGAAAGCCAAAGGATTGTTTTAAAGGAACTCCAGG
AATCTGAAAGAGAAAATGCTCTCATTCCTTTTGAACCAGA
ACAGACAAACGCAAGTAAAAATATCAACCTGTGTCAAATC
ACACGGGGAGCTGAAAAGAAGCTGGAGGAAGAAAAAAGAA
CACAGATTGGCAGGGGTTTACCAGCCTCTTGTAGCACATT
TCTGTCTTGTTTTCTTCTTCCTTTTTTGTA

OTTDART00000058407 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058407|OTTDARG00000020575|ZDB-GENE-990706-5 svila|OTTDARP00000045660 svil-003 LG_none BX005400.8,CU914155.16 Danio rerio protein_coding KNOWN, 750 bp
ATGAAGTTTACCTGTGGCAGGGCTGGTGGCCTCAGGACAG
TGAAAGCACAGGCTCAGCTCGCATACGGTGGGACTCTGAC
AGGAAGTGTGCAATGGAAACTGTGCTCCAGTATAGCAAAG
AAAAAAATGAGAAAAAGACACCAAAATCCTACCTGATCCA
TGCAGGACTGGAGCCTCTTACATTCACCAACATGTTTCCC
AGCTGGGAACACAGAGAGGACATCGCTGAAATCACAGAGA
AGGAGGCCGAAGTATGTCATCAGATCATTCTTGTTGAAGA
TGTCTTGAGCCGACTCTGCAAGACCACTTACCCACTGGCT
GAACTAAAAGCACGTCCCTTACCGGAAGGTGTCGACCCTC
TACGTCTTGAAACCTACTTATCAGATGAGGACTTTGAGTC
TTGCGTCTGACTGAGGTTAATTTTTCCCTTCACATGCCAG
GGTGTAGGGGCTTCTGGGAAGAAAGCTTTGGAGATGACGA
GAAGTGAATATGAGGCACTGCCTGGATGGAAGCAAGTGAA
TGTGAAGAAAGCCAAAGGATTGTTTTAAAGGAACTCCAGG
AATCTGAAAGAGAAAATGCTCTCATTCCTTTTGAACCAGA
ACAGACAAACGCAAGTAAAAATATCAACCTGTGTCAAATC
ACACGGGGAGCTGAAAAGAAGCTGGAGGAAGAAAAAAGAA
CACAGATTGGCAGGGGTTTACCAGCCTCTTGTAGCACATT
TCTGTCTTGTTTTCTTCTTCCTTTTTTGTA

Related Transcripts

Transcripts related to svila

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	svila-207	Ensembl	750 nt
mRNA	svila-201 (1) Ensembl	Ensembl	6,407 nt	Select Tool
mRNA	svila-202 (1) Ensembl	Ensembl	511 nt	Select Tool
mRNA	svila-203 (1) Ensembl	Ensembl	2,851 nt	Select Tool
mRNA	svila-204 (1) Ensembl	Ensembl	553 nt	Select Tool
mRNA	svila-205 (1) Ensembl	Ensembl	896 nt	Select Tool
mRNA	svila-208 (1) Ensembl	Ensembl	8,812 nt	Select Tool ZFIN BLAST
mRNA	svila-209 (1) Ensembl	Ensembl	8,791 nt	Select Tool ZFIN BLAST
ncRNA	svila-005 (1) Ensembl	Ensembl	378 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations